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. 2017 May 16;8:754. doi: 10.3389/fpls.2017.00754

Table 1.

List of significant markers (−log10(P) > 3.0) for anther extrusion in spring and winter wheat panels based on their BLUEs values.

SNP Panel Chr. Pos. −log10(P) Effect %R2 Variant Gene
JD_c285_1438 Winter 1A 115.39 3.51 1.462 14.51 A Traes_1AL_48F565722
Kukri_c51474_334 Winter 1B 70.08 3.06 −1.240 10.72 A Traes_1BL_49BF78501
RAC875_c1755_971 Winter 2B 66.20 3.34 1.358 11.74 C -
wsnp_Ex_c51352_55323092 Spring 2B 97.37 3.09 1.476 9.75 C Traes_2BS_93E49A2FF
BS00013584_51 Spring 3A 77.51 3.14 1.519 11.35 A Traes_3AS_491B176E2
GENE-4918_283 Spring 3B 57.24 3.92 2.003 13.83 T TRAES3BF175400030CFD_g
BS00016407_51 Spring 3B 57.24 3.82 1.990 14.14 C -
IAAV8162 Spring 3B 57.24 3.82 1.990 14.14 A TRAES3BF175400030CFD_g
Excalibur_c25390_2483 Spring 6A 138.31 3.06 −1.421 10.93 A Traes_6AL_65FBA1460
Excalibur_c3959_118 Winter 6A 140.87 3.67 −1.540 12.38 T Traes_6AL_2A11939F7
wsnp_Ku_c16522_25425455 Winter 6B 71.18 3.18 −1.378 16.98 C Traes_6BL_D816BA883
tplb0061f12_679 Winter 6B 71.76 3.62 −1.563 14.28 A Traes_6BL_A7A807541
RFL_Contig1015_620 Winter 6B 71.76 3.62 −1.563 14.28 C Traes_6BL_414885850
wsnp_Ku_c3185_5949143 Winter 6B 71.76 3.62 −1.563 14.28 T Traes_6BL_9145A9A11
RAC875_rep_c108200_137 Winter 6B 71.76 3.62 −1.563 14.28 T Traes_6BL_A5614E593
TA001470-0628 Winter 6B 71.76 3.62 −1.563 14.28 A Traes_6BL_8960BC410
Kukri_rep_c116323_79 Winter 6B 71.76 3.60 −1.517 13.78 A -
Tdurum_contig42487_1555 Spring 7A 212.66 4.36 −1.548 13.27 T Traes_7AL_3ACEF0277
wsnp_BE443010B_Ta_2_1 Spring 7B 76.31 3.89 1.782 11.42 C Traes_7BL_566C6F683
Excalibur_c20309_539 Spring unm unm 4.57 1.542 14.27 C Traes_3DL_4A818FD98
Kukri_rep_c110544_248 Spring unm unm 4.33 1.507 14.24 A Traes_3DL_C1FD5EB05
GENE-3863_132 Spring unm unm 3.16 1.548 10.14 G Traes_6BL_729B4C623
wsnp_Ex_c3670_6694480 Winter unm unm 3.07 1.772 9.44 G Traes_5AL_D05BE87FD

unm stands for unmapped SNPs.

% R2 represents percentage of phenotypic variance imparted by individual SNP; Variant represents minor allele.