Table 3.
Melting temperature and calibration parameters for multiplex HRM-qPCR detection of K99, F41, F18, F6 and K88 fimbriae gene
| K99 | F41 | F18 | F6 | K88 | ||
|---|---|---|---|---|---|---|
| Tm(°C) | 74.7 ± 0.06 | 76.5 ± 0.12 | 77.6 ± 0.35 | 79.5 ± 0.78 | 80.5 ± 0.15 | |
| E a | 1.87 | 1.74 | 1.7 | 1.85 | 1.84 | |
| r1 2 b | 0.99 | 0.99 | 0.99 | 0.99 | 0.99 | |
| DNA range | 1–20% | 0.2%–16.7% | 1%–100% | 0.3%–4.8% | 4.8%–60% | 4.8%–20% |
| Slope c | 2.96 | 2.74 | 2.39 | 0.48 | 1.44 | 1.49 |
| r2 2 d | 0.97 | 0.97 | 0.98 | 0.97 | 0.99 | 0.97 |
aprimer efficiency determined by individual PCR
br1 2, correlation coefficient for standard curve determined by individual qPCR
cSlope for calibration curve correlating the area of the melting peaks area to the proportion of the template DNA
dr2 2, correlation coefficient for standard curve correlating the area of the melting peaks to the proportion of the template DNA