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. 2017 May 16;7:1972. doi: 10.1038/s41598-017-02059-7

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© The Author(s) 2017

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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Mismatch distributions and Bayesian skyline plots for each genetic lineage. In mismatch distributions, bars represent the observed frequency of pairwise differences, whereas the solid lines show the expected values under the sudden expansion model. The BSPs show N _e T (N _e = effective population size; T = generation time) changes through time. Black lines represent median estimates while the blue lines show the 95% highest posterior density (HPD) limits.