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. 2017 May 16;7:1972. doi: 10.1038/s41598-017-02059-7

Table 4.

Summary of molecular diversity and demographic analyses for two lineages of O. oratoria.

Groups N n h л Tajima’s D Fu’s Fs Mismatch distribution
D P Fs P θ 0 θ 1 P(SSD) P(HRI)
mtCOI
Lineage N 249 104 0.969 ± 0.005 0.005 ± 0.003 −2.119 0.000 −25.842 0.000 0.689 9999 0.376 0.548
Lineage S 249 132 0.954 ± 0.008 0.006 ± 0.003 −2.345 0.000 −25.654 0.000 1.182 68.672 0.965 0.727
nrITS
Lineage N 156 100 0.941±0.015 0.003 ± 0.001 −2.865 0.000 −26.409 0.000 0.682 271.895 0.910 0.676
Lineage S 139 107 0.992 ± 0.003 0.005 ± 0.002 −2.650 0.000 −25.135 0.000 0.796 121.719 0.782 0.689

Number of individuals (N), number of haplotypes or ribotypes (n), haplotype diversity (h), nucleotide diversity (л), Tajima’s D and Fu’s F S with corresponding P values for each lineage are shown. θ 0 and θ 1 are θ parameter before and after expansion; P values for the sum of squared deviations (SSD) and raggedness index (HRI) under the hypothesis of sudden expansion of each lineage are also shown.