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. 2017 May 16;5:56. doi: 10.1186/s40168-017-0273-7

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© The Author(s). 2017

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 1 — a Rarefaction curves of observed OTUs richness for each of the three M1 and M2 replicates and using an OTU threshold of ≥97% identity. b Percentage of high-confidence OTUs grouped by phylum: Proteobacteria (blue) and Bacteroidetes (red) (left panel); Latescibacteria (purple), Actinobacteria (orange), Firmicutes (blue), Verrucomicrobia (dark pink) (right panel). c PCA ordination based on Hellinger distances