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. 2016 Nov 21;38(16):1362–1375. doi: 10.1002/jcc.24674

Table 2.

Proteins studied with their PDB codes.

Protein PDB Code Class % β‐strands % β‐turns % α‐helix 310 ‐ helices % Coil No. solvent molecules
α‐Lactalbumin 1ALC α + β 7 30 30 14 19 8053
Carbonmonoxy‐Myoglobin 1MBC α 0 7 74 4 15 6860
Concanavalin A 3CNA β 42 44 0 0 14 11227
Egg White Lysozyme 2LYM α + β 6 40 30 10 14 8412
β‐Trypsinogen 2PTN α + β 32 44 8 3 13 7641
Carboxypeptidase A 5CPA α + β 16 30 35 2 17 10862
Ribonuclease A 7RSA α + β 27 24 18 3 28 6379
Ubiquitin 1UBQ α + β 32 28 16 8 16 5978
Flavodoxin 5NLL α + β 21 19 37 4 19 6782

Their secondary structure content computed using PROMOTIF.92 The number of water molecules used in the MD simulations is provided.