Table 4. Codon analysis of G. thurberi chloroplast genes that code for proteins .
AA | Codon | Number | RSCU | AA | Codon | Number | RSCU |
Phe | TTT | 908 | 1.33 | Ser | TCT | 498 | 1.71 |
TTC | 453 | 0.67 | TCC | 265 | 0.91 | ||
Leu | TTA | 824 | 1.97 | TCA | 355 | 1.22 | |
TTG | 517 | 1.23 | TCG | 156 | 0.54 | ||
CTT | 506 | 1.21 | Pro | CCT | 373 | 1.51 | |
CTC | 153 | 0.37 | CCC | 191 | 0.77 | ||
CTA | 350 | 0.83 | CCA | 272 | 1.1 | ||
CTG | 165 | 0.39 | CCG | 150 | 0.61 | ||
Ile | ATT | 1000 | 150. | Thr | ACT | 479 | 1.56 |
ATC | 384 | 58. | ACC | 251 | 0.82 | ||
ATA | 619 | 93. | ACA | 368 | 1.2 | ||
Met | ATG | 542 | 1 | ACG | 129 | 0.42 | |
Val | GTT | 459 | 142. | Ala | GCT | 626 | 1.77 |
GTC | 166 | 51. | GCC | 242 | 0.68 | ||
GTA | 479 | 148. | GCA | 359 | 1.02 | ||
GTG | 192 | 0.59 | GCG | 187 | 0.53 | ||
Tyr | TAT | 713 | 1.61 | Cys | TGT | 190 | 1.52 |
TAC | 174 | 0.39 | TGC | 60 | 0.48 | ||
Ter | TAA | 47 | 1.76 | Ter | TGA | 17 | 0.64 |
TAG | 16 | 0.6 | Trp | TGG | 458 | 1 | |
His | CAT | 464 | 1.48 | Arg | CGT | 307 | 1.32 |
CAC | 162 | 0.52 | CGC | 116 | 0.5 | ||
Gln | CAA | 663 | 1.53 | CGA | 326 | 1.4 | |
CAG | 203 | 0.47 | CGG | 106 | 0.46 | ||
Asn | AAT | 859 | 1.54 | Ser | AGT | 364 | 1.25 |
AAC | 253 | 0.46 | AGC | 107 | 0.37 | ||
Lys | AAA | 909 | 1.51 | Arg | AGA | 390 | 1.68 |
AAG | 294 | 0.49 | AGG | 148 | 0.64 | ||
Asp | GAT | 767 | 1.59 | Gly | GGT | 554 | 1.29 |
GAC | 196 | 0.41 | GGC | 195 | 0.45 | ||
Glu | GAA | 926 | 1.5 | GGA | 653 | 1.52 | |
GAG | 307 | 0.5 | GGG | 313 | 0.73 |
Note: Codon shown in bold represents RSCU value >1