TABLE 2.
Transcriptional effect of sequences downstream of the C boxes
Downstream enda | pvuIIC alleleb | CAT activityc
|
|
---|---|---|---|
Absolute | Normalized | ||
−24 | WT | 271 ± 20 | 0.03 |
Esp19 | 748 ± 23 | 0.08 | |
+88 | WT | 8,998 ± 1,117 | 1.00 |
Esp19 | 514 ± 44 | 0.06 |
The number of nucleotides from the native pvuII sequence between the C boxes and the reporter gene cloning junction. In both cases, the 5′ endpoints are −93 (relative to the pvuIIC initiation codon). The 3′ endpoints correspond to +3 and +114, respectively, relative to the previously reported promoter (60). In all cases, the consensus C boxes are present in the context of an otherwise WT pvuIIC sequence. In the longer clones, a short substitution immediately downstream of the 3′-most C box generates a restriction site used for clone assembly; substitutions in this area were found not to affect transcription (see text).
C.PvuII is supplied in trans from either the WT allele or a mutant inactive allele in which an extra codon has been inserted within the predicted HTH motif.
CAT activity was measured as described in Materials and Methods and is expressed (± the standard error) as mean counts per minute incorporated per minute per microgram of protein from triplicate samples. The vector control levels (not shown) were subtracted as background.