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. 2017 May 17;12(5):e0177938. doi: 10.1371/journal.pone.0177938

Table 5. DGEs related to alternative sigma factors and two-component system histidine kinases.

Gene Log2FC FDR Gene product description
Alternative sigma factors
HZ99_02125 11.97 2.80E-13 RNA polymerase sigma factor
HZ99_18535 7.63 8.90E-12 RNA polymerase sigma factor
HZ99_27685 7.33 2.63E-13 RNA polymerase sigma factor, ECF subfamily, PvdS
HZ99_23165 5.35 7.59E-08 RNA polymerase subunit sigma-24, ECF subfamily, RpoE
HZ99_15290 4.92 3.17E-07 RNA polymerase sigma factor
HZ99_23145 4.75 1.96E-06 RNA polymerase sigma factor
HZ99_13180 3.71 5.54E-05 RNA polymerase sigma, ECF subfamily
HZ99_17290 2.87 8.65E-03 RNA polymerase sigma-24 factor, ECF subfamily, RpoE
HZ99_24765 2.64 4.90E-03 RNA polymerase sigma factor
HZ99_24995 -4.31 9.67E-05 RNA polymerase sigma-H factor AlgU, ECF subfamily
Two-component system histidine kinase
HZ99_10445 8.29 5.53E-11 two-component sensor histidine kinase BaeS
HZ99_14705 7.87 7.03E-04 histidine kinase
HZ99_01210 7.36 4.53E-03 two-component sensor histidine kinase RstB
HZ99_27235 6.92 1.53E-02 K+-sensing histidine kinase KdpD
HZ99_22560 2.87 1.36E-02 two-component sensor histidine kinase
HZ99_23875 2.24 4.64E-02 histidine kinase EvgS
HZ99_25705 2.24 4.64E-02 histidine kinase
HZ99_23310 -4.40 2.14E-05 histidine kinase
HZ99_15325 -4.55 4.46E-02 two-component system sensor histidine kinase CreC
HZ99_22295 -5.60 5.54E-05 histidine kinase
HZ99_02845 -6.72 2.58E-02 two-component sensor histidine kinase
HZ99_00900 -7.30 4.53E-03 hybrid sensor histidine kinase/response regulator BaeS
HZ99_11515 -8.23 1.42E-04 two-component system response regulator RpfG