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. Author manuscript; available in PMC: 2018 Jun 1.
Published in final edited form as: Am J Med Genet B Neuropsychiatr Genet. 2017 Apr 26;174(4):413–426. doi: 10.1002/ajmg.b.32530

Table 5.

Significant SNPs in iron genes associated with GDS.

Gene SNP Chr. BP P Distance
GDS continuous
B2M rs1690313 15 42792952 0.029 0
BMP6 rs7753111 6 7675943 1.83×10−3 0
BMP6 rs1358893 6 7731412 6.56×10−3 0
BMP6 rs9379137 6 7733601 3.93×10−3 0
BMP6 rs911750 6 7738181 0.045 0
BMP6 rs9392924 6 7740099 0.030 0
BMP6 rs927406 6 7752303 0.028 0
BMP6 rs267180 6 7775140 0.024 0
CP rs13075921 3 150398318 0.040 0
HEPH rs6624875 23 65325170 7.85×10−3 0
HEPH rs5965110 23 65333737 0.040 0
HEPH rs1264212 23 65341266 4.03×10−3 0
HEPH rs809363 23 65343849 0.041 0
HEPH rs806608 23 65345254 0.048 0
HEPH rs806610 23 65350264 0.045 0
HEPH rs1091486 23 65356189 0.035 0
HEPH rs1598697 23 65417224 0.030 13.3kb
SLC40A1 rs6434347 2 190122538 0.042 Upstream 11.02kb
GDS binary
B2M rs1690313 15 42792952 4.18×10−3 0
BMP6 rs267180 6 7775140 8.34×10−3 0
FTH1 rs2028062 11 61502529 0.041 10.8kb
FTH1 rs10792320 11 61502867 0.019 11.16kb
HEPH rs806668 23 65284240 0.016 Upstream 15.15kb
HEPH rs6624875 23 65325170 1.86×10−4 0
HEPH rs5965110 23 65333737 9.27×10−3 0
HEPH rs5964501 23 65341013 0.041 0
HEPH rs1264212 23 65341266 1.08×10−4 0
HEPH rs809363 23 65343849 7.37×10−3 0
HEPH rs806608 23 65345254 5.90×10−3 0
HEPH rs806610 23 65350264 5.45×10−3 0
HEPH rs1091486 23 65356189 3.96×10−3 0
HEPH rs708968 23 65386371 0.014 0
HEPH rs708969 23 65386620 0.012 0
HEPH rs1598697 23 65417224 0.039 13.3kb
SLC11A2 rs17125137 12 49651273 0.042 Upstream 14.77kb

Abbreviations: Chr., chromosome; BP, physical position (base-pair); Dist, distance between the SNP and the start or end position of the gene. A distance of 0 indicates the SNP is located within the gene body.