Table 1. List of selected genes that have both p27 and PCAF- binding sites (BSs) in their vicinity. The table includes localization and extension of the p27- and PCAF-BSs and the intensity of the binding (Fold-enrichment).
ChIP-seq | Cromosome | Start | End | Fold-enrichment | Inside feature | Distance to feature | |
---|---|---|---|---|---|---|---|
GABRG2 | p27 | chr5 | 161583970 | 161584252 | 9.91 | Downstream | 156675 |
PCAF | chr5 | 161580341 | 161580611 | 11.44 | Downstream | 153046 | |
GHR | p27 | chr5 | 42434475 | 42434749 | 8.49 | Upstream | -25308 |
PCAF | chr5 | 42267322 | 42267561 | 10.01 | Upstream | -192461 | |
GRIN3A | p27 | chr9 | 103520403 | 103520670 | 8.49 | Inside | 20280 |
PCAF | chr9 | 103539425 | 103539691 | 8.58 | Inside | 1258 | |
IGF1R | p27 | chr15 | 97121406 | 97121648 | 9.91 | Inside | 111104 |
PCAF | chr15 | 97135969 | 97136244 | 11.86 | Inside | 125667 | |
PCAF | chr15 | 96961148 | 96961421 | 8.46 | Upstream | -49154 | |
ROBO1 | p27 | chr3 | 79257543 | 79257776 | 9.83 | Upstream | -163 |
PCAF | chr3 | 80182644 | 80183002 | 11.44 | Upstream | -460893 | |
PCAF | chr3 | 80060831 | 80061238 | 10.15 | Upstream | -339080 | |
UNC5D | p27 | chr8 | 35345752 | 35346062 | 8.49 | Inside | 132907 |
p27 | chr8 | 35652578 | 35652839 | 8.49 | Inside | 131126 | |
PCAF | chr8 | 35828412 | 35828659 | 8.58 | Downstream | 306960 | |
IL7 | p27 | chr8 | 80047436 | 80047703 | 11.32 | Upstream | -167123 |
p27 | chr8 | 80007304 | 80007574 | 9.91 | Upstream | -126991 | |
PCAF | chr8 | 79892345 | 79892640 | 7.98 | Upstream | -12032 | |
ARHGEF7 | p27 | chr13 | 110645835 | 110646168 | 6.97 | Upstream | -9802 |
PCAF | chr13 | 110492766 | 110493092 | 10.15 | Upstream | -73017 | |
RERGL | p27 | chr12 | 18151836 | 18152131 | 11.32 | Upstream | -17455 |
PCAF | chr12 | 17993973 | 17994265 | 12.87 | Downstream | 140408 | |
SPAG9 | p27 | chr17 | 46415723 | 46416022 | 8.9 | Inside | 63547 |
PCAF | chr17 | 46406076 | 46406443 | 8.87 | Inside | 73194 | |
CRBN | p27 | chr3 | 3355488 | 3355749 | 9.64 | Upstream | -159098 |
p27 | chr3 | 3328299 | 3328565 | 11.32 | Upstream | -131909 | |
PCAF | chr3 | 3417081 | 3417428 | 11.44 | Upstream | -220691 | |
GLI3 | p27 | chr7 | 42180561 | 42180853 | 11.32 | Inside | 48859 |
PCAF | chr7 | 42190975 | 42191217 | 8.12 | Inside | 38445 | |
ZNF716 | p27 | chr7 | 57555151 | 57555705 | 7.79 | Downstream | 41320 |
PCAF | chr7 | 57555035 | 57555523 | 7.7 | Downstream | 41204 | |
DGCR6 | p27 | chr22 | 17263635 | 17264251 | 9.48 | Upstream | -10144 |
PCAF | chr22 | 17263972 | 17264283 | 8.79 | Upstream | –9807 |