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. 2017 May 18;12(5):e0177504. doi: 10.1371/journal.pone.0177504

Table 3. Distribution of SNPs genotyping in case (patients with esophageal, lung or gastric cancer) and controls (normal healthy subjects).

SNPs Gene Allele MAF(n) P OR 95%CI Reference number Cancer type
Cases Controls
rs36600 MTMR3 T/C 0.117(1978) 0.086(2540) 0.0000 1.38 1.21 1.58 [14] LC
Rs3769823 CASP8 T/C 0.29(2961) 0.27(3400) 0.0001 1.29 1.18 1.38 [9] EC
Rs2244438 TRAK2 G/A 0.25(2961) 0.23(3400) 0.000 1.35 1.26 1.49 [9] EC
rs748404 TGM5 C/T 0.825(1447) 0.797(36256) 0.0005 1.08 1.33 1.20 [16] LC
rs9841504 ZBTB20 G/C 0.09(4294) 0.14(5882) 0.000 0.58 0.47 0.72 [20] GA
rs2909430 TP53 G/A 0.17(443) 0.10(547) 0.000 1.94 1.06 3.57 [18] LC
rs78378222 TP53 A/C 0.21(1014) 0.19(1839) 0.0001 0.85 0.46 1.53 [19] LC
rs10931936 CASP8 T/C 0.27(1974) 0.31(2617) 0.0000 1.29 1.19 1.40 [3] EC
rs4254535 GKN2/GKN1 C/T 0.67(1452) 0.68(36203) 0.0000 0.97 0.89 1.05 [16] LC
rs13042395 C20orf54 T/C 0.47(380) 0.48(380) 0.0000 0.98 0.72 1.33 [20] EC
rs8034191 AGPHD1 C/T 0.21(467) 0.16(388) 0.0036 1.61 1.17 2.21 [15,17] LC
rs7578456 TRAK2 A/G 0.24(1974) 0.28(2617) 0.0000 1.27 0.17 1.38 [11] EC
rs2352028 GPC5 T/C 0.32(295) 0.35(598) 0.0000 0.89 0.66 1.20 [13] LC
rs13016963 ALS2CR12 A/G 0.27(2961) 0.31(3400) 0.0000 1.29 1.19 1.40 [9] EC
rs4975616 TERT/CLPTM1 G/A 0.42(239) 0.48(553) 0.001 0.56 0.40 0.80 [16] LC
rs1530057 RBMS3 A/C 0.05(1429) 0.05(36224) 0.0000 0.01 0.83 1.23 [16] LC
rs1926203 ACTA2 T/G 0.67(1466) 0.67(36273) 0.0000 0.99 0.90 1.08 [16] LC
rs13361707 PRKAA1 T/C 0.57(4294) 0.48(5882) 0.0000 1.42 1.24 1.62 [20] GA
rs2808630 CRPP1/CRP C/T 0.40(96) 0.41(124) 0.0000 1.04 0.74 1.36 [16] LC
rs753955 MIPEP/TNFRSF C/T 0.33(2331) 0.28(3065) 0.000 1.24 1.14 1.35 [14] LC