Table 1. Gene expression in ΔtprA2 compared to the PN4595-T23 (WT) in planktonic cultures represented as ratio to the WT level (n = 3).
| Gene ID | Target Gene | qRT-PCR | Microarray | Nanostring | |||
|---|---|---|---|---|---|---|---|
| ΔtprA2/WT | P-value | ΔtprA2/WT | P-value | ΔtprA2/WT | P-value | ||
| CGSSp4595_1262 | tprA2 | 0 | -19 | <2.2E-16 | NA | 2.18E-02 | |
| CGSSp4595_1261 | phrA2 | 70.7 | 5.54E-04 | +32.6 | <2.2E-16 | NA | NA |
| CGSSp4595_1260 | ABC transporter (ATPase) | 85.6 | 5.52E-03 | +34.7 | <2.2E-16 | +63.8 | 1.06E-02 |
| Not annotated | lcpA | 45.2 | 9.26E-04 | +62.1 | <2.2E-16 | +71 | 2.25E-02 |
| CGSSp4595_1257 | lcpM | 37.9 | 5.32E-03 | +45.4 | <2.2E-16 | +57.8 | 1.65E-02 |
| CGSSp4595_1256 | lcpT | 37.2 | 4.11E-03 | +40.4 | <2.2E-16 | +47.3 | 2.12E-02 |