Table 2.
Differentially expressed genes related to seed germination and ROS metabolism in Col-0 and abi5-1
| Gene_ID | Gene names | Fold change (abi5-1/Col-0) |
Up/Down | Gene description | Pathway |
|---|---|---|---|---|---|
| AT1G15550 | GA3OX1 | 0.158792 | Down | Gibberellin 3-oxidase 1 | GA biosynthesis |
| AT1G66350 | RGL1 | 0.394985 | Down | RGA-like 1 | GA signaling |
| AT5G45830 | DOG1 | 8.766422 | Up | Delay of germination 1 | Seed development |
| AT3G51810 | EM1 | 0.169394 | Down | Stress induced protein | |
| AT2G40170 | EM6 | 0.477625 | Down | Stress induced protein | |
| AT1G78390 | NCED9 | 2.70285 | Up | Nine-cis-epoxycarotenoid dioxygenase 9 | ABA metabolism |
| AT2G40330 | PYL6 | 0.450936 | Down | PYR1-like 6 | ABA signaling |
| AT2G26040 | PYL2 | 0.493138 | Down | PYR1-like 2 | |
| AT2G38310 | PYL4 | 0.410952 | Down | PYR1-like 4 | |
| AT4G01026 | PYL7 | 5.927423 | Up | PYR1-like 7 | |
| AT3G19290 | ABF4 | 3.243769 | Up | ABRE binding factor 4 | |
| AT5G57050 | ABI2 | 2.09312 | Up | Protein phosphatase 2C family protein | |
| AT2G31570 | GPX2 | 3.094566 | Up | Glutathione peroxidase 2 | ROS metabolism |
| AT4G11600 | GPX6 | 0.483308 | Down | Glutathione peroxidase 6 | |
| AT1G77490 | APXT | 2.813915 | Up | Thylakoidal ascorbate peroxidase | |
| AT2G35690 | ACX1.2 | 4.115625 | Up | Acyl-CoA oxidase 5 |
P-value < 0.05; Differentially expressed genes twofold-down-expression change or twofold-up-expression change