Skip to main content
. 2017 May 5;13(5):e1005525. doi: 10.1371/journal.pcbi.1005525

Table 1. Parameter estimates used in our model.

Parameter Meaning Estimated Value Units
jc Rate of active transport of 1,2-PD across the cell membrane 1 (when present) [22] cms
kcA Permeability of the Pdu MCP to propionaldehyde 10−5 cms
kcP Permeability of the Pdu MCP to 1,2-PD 10−5 cms
Rb Radius of the bacterial cell 5x10−5 cm
Rc Radius of the Pdu MCP 10−5 [12] cm
D Diffusivity of metabolites in the cellular milieu 10−5 [37] cm2s
kmA Permeability of the cell membrane to propionaldehyde 10−3 [38] cms
kmP Permeability of the cell membrane to 1,2-PD 10−3 [39] cms
kcatCDE Maximum reaction rate of a PduCDE active site 3x102 [39] 1s
NCDE Number of PduCDE enzymes per cell 1.5x103 [12] 1cell
KMCDE Michaelis-Menten constant of PduCDE 5x102 [39] μM
kcatPQ Maximum reaction rate of a PduPQE active site 55 [16] 1s
KMPQ Michaelis-Menten constant of PduPQ 1.5x104 [16] μM
NPQ Number of PduPQ enzymes per cell 2.5x103 [12] 1cell
Pout External 1,2-PD concentration 5.5x104 [21] μM
Aout External propionaldehyde concentration 0 [21] μM