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. 2017 Apr 18;6:e23971. doi: 10.7554/eLife.23971
Parameter name Value Comment
ε 0.06 mM min−1 Basal H2O2 production rate in the absence of external H2O2
Determined by a fitting procedure to data in Figure 6.
α 1 min−1 H2O2 transport rate across cell membrane. Taken from Figure 1—figure supplement 1C.
β 10 mM−1 min−1 H2O2 scavenging rate. Derived from the absolute adaptation concentration Iabs in Figure 3.
γ 0.1 mM−1 min−1 Antioxidant transcription rate. Derived from the absolute adaptation concentration Iabs in Figure 3.
μ μ=log(2)/40 min−1 Antioxidant mRNA decay rate. See the linear model above for the determination of parameter value.
γ’ 0.005 mM−1 min−1 Antioxidant translation rate. Derived from the absolute adaptation concentration Iabs in Figure 3.
μ’ log(2)/100 min−1 Antioxidant protein decay rate. Tsa1 is a stable protein, therefore, the decay is due to the dilution rate set by cell growth (doubling time ~ 100 min).
K 0.01 mM Order of magnitude of internal H2O2 at which antioxidant. transcription saturates. Taken from Figure 6—figure supplement 1C.
W 0.01 mM Order of magnitude of internal H2O2 at which H2O2 scavenging rate saturates. The ratio K/W ~ 1 gave the best fit to curves in Figure 6, hence the order of magnitude of this parameter.