Table 1.
Total Number of Peptides Retained for HDX Peptide Maps as Identified by MSE and UDMSE Analysis. Peptides were Filtered from Database Search Results Prior to Peptide Map Generation Based on Replication, Presence of Fragments, and Mass Accuracy
| Sample | MSE No peptides | MSE Coverage (%) | MSE redundancy | UDMSE No peptides | UDMSE Coverage (%) | UDMSE Redundancy | MSE UDMSE Common peptides |
|---|---|---|---|---|---|---|---|
| rhGH | 99 | 95.8 | 6.23 | 93 | 97.9 | 5.50 | 74 |
| Transferrin | 270 | 95.7 | 6.12 | 271 | 91.0 | 6.49 | 175 |
| Transferrin (BSA matrix) | 198 | 94.8 | 5.11 | 221 | 90.3 | 5.20 | 109 |