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. 2017 May 17;83(11):e00547-17. doi: 10.1128/AEM.00547-17

TABLE 1.

Primer, probe, and inhibition control synthetic gene sequences

Primer, probe, or control gene name Sequence (5′–3′)a
E. vermicularis 5S_fwd CAAACAACTGCATCACCAATAAC
E. vermicularis 5S_rev AGTGTAGAGCAATAAGCAGTAAAG
E. vermicularis 5S probe FAM-TACCAACAACACTTGCACGTCTCTTCA-IBFQ
E. caproni 28S_fwd TAGGCAATGTGGTGTTCAGG
E. caproni 28S_rev CATAGAGGGTGAAAGGCCC
E. caproni 28S probe FAM-AGGACTTAGGGTGGAGCAGTATCCC-IBFQ
Inhib Con_fwd GGTTACGTTACCGATTGTGTTAT
Inhib Con_rev GCACGGAGAAGTATTCTTGATATAG
Inhibition control probe JOE-TCGCATACTATGACCGAGACCCTGT-IBFQ
Inhibition control sequence CCAATGCAATGGCTAACACAATATTATATTTTAAAGAATGAATATCATAAGACCATGCTAGCGTATGATAATGGATCTTGGACATAAGATATAGTTCTTATGAAGAGGCAAAAAAACACGATGATGGACTTATCATTATTTCTATATTCTTACAAGTATTGGATCATAA
a

FAM, 6-carboxyfluorescein; IBFQ, Iowa black fluorescent quencher; JOE, 6′-carboxy-4′,5′-dichloro-2′,7′-dimethoxyfluorescein, succinimidyl ester.