TABLE 6.
Infection of U87 cells
Virus | GHOSTb | RT concna
|
||||||
---|---|---|---|---|---|---|---|---|
Parental | CCR1 | CCR2b | CCR3 | CCR5 | CXCR4 | CXCR6 | ||
Aviremic individuals | ||||||||
RH2-3 3B3 | R5G15X6 | 15,274 | 3,795 | 216 | 3,946 | 16,092 | 3,059 | 6,143 |
RH2-3 3C3 | R5G15X6 | 31,055 | 4,965 | 477 | >31,055 | >31,055 | 7,683 | 16,701 |
RH2-3 5B1 | R5G15X6 | 7,394 | 1,718 | 324 | 5,876 | >31,055 | 1,829 | 1,272 |
RH2-3 8A5 | R5G15X6 | >31,055 | 2,013 | 303 | 2,823 | 17,001 | 1,834 | 10,598 |
RH2-3 8A3 | R5G15X6 | 13,886 | 3,523 | 202 | 6,105 | 22,182 | 3,071 | 2,008 |
RH2-13 1D6 | R5G15X6 | >31,055 | 3,363 | 341 | 21,154 | 27,143 | >31,055 | 1,859 |
RH2-13 5C1 | R5G15X6 | >31,055 | 3,595 | 116 | 8,169 | >31,055 | 16,336 | 2,927 |
RH2-13 7C3 | R5G15X6 | 27,631 | 826 | 100 | 143 | 26,904 | 678 | 1,959 |
RH2-13 6A2 | R5G15X6p | >31,055 | 4,827 | 212 | 10,103 | >31,055 | 18,746 | 1,387 |
RH2-13 6B1 | R5G15X6p | − | − | − | − | >31,055 | NT | 11 |
RH2-14 1C3 | R5G15X6 | 1,444 | 1,426 | 100 | 498 | 29,452 | 519 | 9,996 |
RH2-14 1D1 | R5G15X6 | 5,484 | 865 | 113 | 431 | 9,902 | 675 | 13,341 |
RH2-14 2A2 | R5G15X6 | 4,165 | 3,529 | 389 | 639 | >31,055 | 448 | >31,055 |
RH2-14 2A5 | R5G15X6 | 4,867 | 3,582 | 156 | 823 | 27,631 | 330 | 9,098 |
RH2-14 2D5 | R5G15X6 | 1,921 | 646 | 103 | 71 | 18,281 | 102 | 9,809 |
RH2-22 2B2 | R5G15X6 | 617 | 42 | − | 19 | 14,658 | 16 | 1,302 |
RH2-22 2C4 | R5G15X6 | 365 | 33 | 13 | − | 8,349 | 39 | 1,323 |
RH2-22 3A1 | R5G15X6 | 226 | − | − | 11 | 19,186 | 16 | 310 |
RH2-22 2A4 | R5G15X6p | 639 | 39 | 15 | 32 | >31,055 | 68 | 4,304 |
RH2-22 1B1 | R1R5G15X6p | 438 | 71 | 19 | 45 | 7,652 | 68 | 1,649 |
RH2-22 1B2 | R1R5G15X6p | 555 | 26 | − | 11 | 10,837 | 21 | 2,152 |
RH2-22 2C2 | R5G15X6p | 166 | 29 | 16 | 49 | 5,829 | 28 | 724 |
RH2-8 3D5 | R5G15X6p | 48 | 16 | − | − | 12,388 | − | 52 |
RH2-4 3B1 | R5G15X6p | 6,806 | 1,255 | 449 | 1,168 | 20,467 | 962 | 15,786 |
RH2-4 4D1 | R5G15X6 | 758 | 375 | 107 | 273 | 27,083 | 131 | 3,988 |
Viremic individuals | ||||||||
Asymptomatic | ||||||||
RH2-15 B9 | R5G15X6 | 81 | 12 | − | − | 11,685 | 11 | 888 |
RH2-15 E5 | R5G15 | 52 | − | − | − | 21,404 | − | 252 |
RH2-15 A9 | − | 56 | − | 19 | − | 31 | − | 48 |
RH2-15 E10 | R3R5G15X6 | 39 | 162 | 42 | 18,450 | 15,117 | 20,669 | 14,314 |
Progressor | ||||||||
RH2-1 A9 | R5G15 | 136 | 21 | − | − | 25,645 | − | 100 |
RH2-1 C7 | R5 | 892 | 31 | − | − | 17,690 | − | − |
RH2-1 D9 | R5G15 | 42 | 13 | − | 10 | 10,700 | − | 30 |
RH2-1 G7 | R5G15 | 6,585 | 162 | − | 18 | 17,786 | 176 | 527 |
RH2-5 2D11 | R5G15X6 | 9,793 | − | − | − | >31,055 | − | 661 |
RH2-5 2A12 | R5G15X6 | 927 | 42 | 37 | − | 24,838 | 212 | 324 |
RH2-5 2F10 | R5G15X6p | 30,078 | 10,889 | 206 | 20,467 | 15,301 | 1,379 | 11,875 |
RH2-7 E4 | R5G15X6 | 19,935 | 107 | 10 | − | 9,809 | 220 | 9,809 |
RH2-7 B3 | R5G15X6p | 27,385 | 24,733 | 2,208 | 14,509 | 23,918 | 25,380 | >31,055 |
Shown are concentrations of RT (pg/ ml) in culture supernatants after 14 days of culture. Negative cutoff of the assay is 10 pg/ml. Values below cutoff are considered negative (−). Values in the coreceptor-transduced cell lines that are at least 1.5 times higher than values in parental cells are underlined. NT, not tested.
Coreceptor usage in GHOST cells as deduced from tables 3 and 5. R1, CCR1; R5, CCR5; G15, GPR15; X6, CXCR6; p, parental infection. Note that GPR15 was not tested in U87 cells.