Table 3. Candidate mutant Kras transcriptome signature.
| Gene symbol | Gene name | ΔGE LLC* | ΔGE MC38* | ΔGE AE17* |
|---|---|---|---|---|
| Asns | Asparagine synthetase | +12.7 | +11.6 | +11.2 |
| Bcat1 | Branched chain aminotransferase 1, cytosolic | +11.2 | +17.6 | +12.2 |
| Casp3 | Caspase 3 | +12.7 | +16.0 | +17.4 |
| Ccl2 | Chemokine (C–C motif) ligand 2 | +85.4 | +119.3 | +97.7 |
| Ccl7 | Chemokine (C–C motif) ligand 7 | +11.3 | +14.4 | +17.8 |
| Cep170 | Centrosomal protein 170 | +15.3 | +11.6 | +13.5 |
| Dab2 | Disabled 2, mitogen-responsive phosphoprotein | +12.7 | +18.2 | +10.4 |
| Dusp9 | Dual specificity phosphatase 9 | +13.1 | +15.5 | +17.0 |
| Gm10717 | Predicted gene 10717 | +10.9 | +33.3 | +45.6 |
| Gm10721 | Predicted gene 10721 | +10.9 | +15.1 | +31.4 |
| Gm10722 | Predicted gene 10722 | +15.2 | +241.9 | +60.5 |
| Gm26523 | Predicted gene, 26523 | +56.3 | +52.0 | +36.4 |
| Gpr149 | G protein-coupled receptor 149 | +33.1 | +33.9 | +12.5 |
| Hist1h1b | Histone cluster 1, H1b | +42.9 | +50.3 | +48.2 |
| Hjurp | Holliday junction recognition protein | +10.3 | +14.4 | +11.3 |
| Lhfp | Lipoma HMGIC fusion partner | +24.9 | +27.2 | +23.5 |
| Mpp1 | Membrane protein, palmitoylated | +10.6 | +16.3 | +21.3 |
| Nid1 | Nidogen 1 | +13.6 | +16.0 | +15.0 |
| Nid1 | Nidogen 1 | +10.3 | +15.2 | +11.3 |
| Prrx1 | Paired related homeobox 1 | +27.5 | +26.9 | +23.9 |
| Prune2 | Prune homolog 2 (Drosophila) | +24.5 | +17.5 | +27.0 |
| Psat1 | Phosphoserine aminotransferase 1 | +12.3 | +13.3 | +11.1 |
| S100a4 | S100 calcium binding protein A4 | +13.4 | +12.5 | +10.1 |
| Slc30a4 | Solute carrier family 30 (Zinc transporter), member 4 | +20.6 | +11.7 | +16.2 |
| Snora17 | Small nucleolar RNA, H/ACA box 17 | +18.3 | +11.5 | +26.6 |
The 25 transcripts identified from comparative analyses of global gene expression between five murine cancer cell lines (LLC, MC38, AE17, B16F10, and PANO2 cells) and benign airway epithelial cells by alphabetic order.
*ΔGE, fold-difference in gene expression between Kras-mutant tumour cells and benign airway epithelial cells. Ccl2 was the most consistently over-represented transcript across all three cell lines examined. LLC, C57BL/6 Lewis lung carcinoma; MC38, C57BL/6 colon adenocarcinoma; AE17, C57BL/6 malignant pleural mesothelioma.