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. 2017 Apr 24;114(19):4954–4959. doi: 10.1073/pnas.1615585114

Table S2.

Data collection and refinement statistics

Statistic TtuA-4Fe4S complex TtuA-FeS-AMPPNP complex TtuA-TtuB (G65C) complex*
Data collection
 Diffraction source BL32XU, Spring-8 BL17A, Photon Factory NW3A, Photon Factory
 Temperature, K 100 100 100
 Space group P6122 P6122 P1
 Unit-cell parameters, Å a and b = 93.9; c = 264.5 a and b = 92.9; c = 266.9 a = 54.1; b = 93.9; c = 97.5; α = 109.2; β = 104.6; γ = 106.9
 Wavelength, Å 0.98 1.35 1.28251
 Mosaicity, ° 0.094 0.056 0.414
 Resolution range, Å 50.0–2.75 (2.91–2.75) 46.5–2.70 (2.86–2.70) 47.8–2.50 (2.65–2.50)
 Total no. of reflections 195,685 274,464 207,808
 No. of unique reflections 18,794 35,452 105,373
 Completeness, % 99.9 (99.9) 99.8 (98.8) 94.9 (93.2)
 Multipicity 10.4 (10.5) 7.7 (7.6) 1.97 (1.87)
 Average I/σ(I) 21.6 (4.30) 18.0 (2.74) 16.24 (2.79)
Rmeas, % 8.4 (57.4) 9.2 (77.3) 5.5 (39.6)
Rsym, % 7.9 (54.6) 8.6 (72.1) 3.9 (28.0)
 CC1/2, % 99.9 (92.4) 99.9 (85.6) 99.8 (85.8)
 Overall B factor from Wilson plot, Å2 62 60 51
Data refinement
 Resolution range, Å 47.96–2.75 (2.90–2.75) 46.46–2.70 (2.84–2.70) 47.85–2.50 (2.55–2.50)
 No. of reflections 18,794 (2,580) 19,685 (2,704) 53,904 (2,561)
 Rwork, %§ 21.9 (26.9) 21.6 (27.0) 19.6 (25.4)
Rfree, % 25.7 (30.8) 23.7 (31.0) 24.7 (32.9)
 Protomers per asymmetric unit 1 1 8
 No. of atoms
  Protein 2,328 2,397 11,741
  Ligands 40 77 47
  Solvent 25 39 81
 rmsd
  Bond, Å 0.01 0.009 0.003
  Angle, ° 1.319 0.96 0.678
 Ramachandran plot
  Favored, % 97.22 97.31 98.05
  Allowed, % 2.78 2.69 1.95
  Outliers, % 0 0 0
  Clashscore 6.5 7.07 5.03
PDB ID code 5B4F 5B4E 5GHA

Values for the outer shell are given in parentheses.

*

The statistics for the TtuA-TtuB(G65C) complex are from our previous report (34).

Rmeas = Σhkl{N(hkl)/N(hkl) − 1}1/2Σi|Ii(hkl)-I(hkl)|/ΣhklΣiIi(hkl), where Ii(hkl) and N(hkl) are the mean intensity of a set of equivalent reflections and the multiplicity, respectively.

Rsym= ΣhklΣi |Ii(hkl) − I(hkl)|/ΣhklΣiIi(hkl), where Ii(hkl) is the ith observation of reflection hkl and I(hkl) is the weighted average intensity for all observations I of reflection hkl.

§

Rwork (%) = Σhkl||Fobs(hkl)| − |Fcalc(hkl)||/Σhkl|Fobs(hkl)|.

Rfree (%) = Rwork calculated using 5% of the reflection data chosen randomly and omitted from the refinement.

Four copies of the TtuA-TtuB heterodimer were located in an asymmetric unit.