Skip to main content
. 2017 May 1;114(20):5247–5252. doi: 10.1073/pnas.1702725114

Table S1.

One hundred ninety regions analyzed that contained samples from at least four of six Allen Human Brain Atlas donors

Structure category Structure name Acronym HEX
Frontal lobe Zona incerta ZI FF5D62
Frontal lobe Ventral tegmental area VTA FF5D62
Frontal lobe Inferior frontal gyrus, triangular part trIFG FF5D62
Frontal lobe Transverse gyri TG FF5D62
Frontal lobe Tail of the caudate nucleus TCd FF5D62
Frontal lobe Superior temporal gyrus, lateral bank of gyrus STG-l FF5D62
Frontal lobe Superior temporal gyrus, inferior bank of gyrus STG-i FF5D62
Frontal lobe Superior parietal lobule, superior bank of gyrus SPL-s FF5D62
Frontal lobe Superior parietal lobule, inferior bank of gyrus SPL-i FF5D62
Frontal lobe Spinal trigeminal nucleus Sp5 FF5D62
Frontal lobe Superior occipital gyrus, superior bank of gyrus SOG-s FF5D62
Frontal lobe Substantia nigra, pars reticulata SNR FF5D62
Frontal lobe Substantia nigra, pars compacta SNC FF5D62
Frontal lobe Supramarginal gyrus, superior bank of gyrus SMG-s FF5D62
Frontal lobe Supramarginal gyrus, inferior bank of gyrus SMG-i FF5D62
Frontal lobe Short insular gyri SIG FF5D62
Frontal lobe Superior frontal gyrus, medial bank of gyrus SFG-m FF5D62
Frontal lobe Superior frontal gyrus, lateral bank of gyrus SFG-l FF5D62
Frontal lobe Subthalamic nucleus Sb FF5D62
Frontal lobe Subiculum S FF5D62
Frontal lobe Red nucleus RN FF5D62
Frontal lobe Raphe nuclei of medulla RaM FF5D62
Parietal lobe Reticular nucleus of thalamus R E9BF59
Parietal lobe VIIB, paravermis PV-VIIB E9BF59
Parietal lobe VI, paravermis PV-VI E9BF59
Parietal lobe V, paravermis PV-V E9BF59
Parietal lobe IV, paravermis PV-IV E9BF59
Parietal lobe Crus II, paravermis PV-Crus II E9BF59
Parietal lobe Crus I, paravermis PV-Crus I E9BF59
Parietal lobe Putamen Pu E9BF59
Parietal lobe Preoptic region PrOR E9BF59
Parietal lobe Precentral gyrus, superior lateral aspect of gyrus PrG-sl E9BF59
Parietal lobe Precentral gyrus, bank of the precentral sulcus PrG-prc E9BF59
Parietal lobe Precentral gyrus, inferior lateral aspect of gyrus PrG-il E9BF59
Temporal lobe Pontine reticular formation PRF FF9200
Temporal lobe Postcentral gyrus, superior lateral aspect of gyrus PoG-sl FF9200
Temporal lobe Postcentral gyrus, bank of the central sulcus PoG-cs FF9200
Temporal lobe Pontine nuclei Pn FF9200
Temporal lobe Planum polare PLP FF9200
Temporal lobe Parahippocampal gyrus, lateral bank of gyrus PHG-l FF9200
Temporal lobe Parahippocampal gyrus, bank of the cos PHG-cos FF9200
Temporal lobe Posterior hypothalamic area PHA FF9200
Temporal lobe Precuneus, superior lateral bank of gyrus Pcu-s FF9200
Temporal lobe Precuneus, inferior lateral bank of gyrus Pcu-i FF9200
Temporal lobe Paracentral lobule, anterior part, inferior bank of gyrus PCLa-i FF9200
Temporal lobe Occipitotemporal gyrus, superior bank of gyrus OTG-s FF9200
Temporal lobe Occipitotemporal gyrus, inferior bank of gyrus OTG-i FF9200
Temporal lobe Inferior frontal gyrus, orbital part orIFG FF9200
Temporal lobe Middle temporal gyrus, superior bank of gyrus MTG-s FF9200
Temporal lobe Middle temporal gyrus, inferior bank of gyrus MTG-i FF9200
Temporal lobe Medial orbital gyrus MOrG FF9200
Occipital lobe Medial geniculate complex MG E87651
Occipital lobe Middle frontal gyrus, superior bank of gyrus MFG-s E87651
Occipital lobe Middle frontal gyrus, inferior bank of gyrus MFG-i E87651
Occipital lobe Lateral orbital gyrus LOrG E87651
Occipital lobe Lateral medullary reticular group LMRt E87651
Occipital lobe Lingual gyrus, striate LiG-str E87651
Occipital lobe Lingual gyrus, peristriate LiG-pest E87651
Occipital lobe Long insular gyri LIG E87651
Occipital lobe Lateral hypothalamic area, mammillary region LHM E87651
Occipital lobe Dorsal lateral geniculate nucleus LGd E87651
Insula Lateral nucleus LA FFF162
Insula Inferior temporal gyrus, bank of mts ITG-mts FFF162
Cingulate Inferior temporal gyrus, lateral bank of gyrus ITG-l 7E5B33
Cingulate Inferior temporal gyrus, bank of the its ITG-its 7E5B33
Cingulate Inferior olivary complex IO 7E5B33
Cingulate Rostral group of intralaminar nuclei ILr 7E5B33
Cingulate Caudal group of intralaminar nuclei ILc 7E5B33
Cingulate Heschl’s gyrus HG 7E5B33
Hippocampus VIIIA, lateral hemisphere He-VIIIA FEBA65
Hippocampus VIIB, lateral hemisphere He-VIIB FEBA65
Hippocampus VI, lateral hemisphere He-VI FEBA65
Hippocampus Crus II, lateral hemisphere He-Crus II FEBA65
Hippocampus Crus I, lateral hemisphere He-Crus I FEBA65
Hippocampus Head of the caudate nucleus HCd FEBA65
Parahippocampus Gyrus rectus GRe B48D3F
Parahippocampus Globus pallidus, internal segment GPi B48D3F
Amygdala Gigantocellular group GiRt 00B4AA
Amygdala Fusiform gyrus, bank of the its FuG-its 00B4AA
Amygdala Fusiform gyrus, bank of cos FuG-cos 00B4AA
Amygdala Frontal operculum fro 00B4AA
Amygdala Posterior group of nuclei DTP 00B4AA
Amygdala Medial group of nuclei DTM 00B4AA
Basal ganglia Lateral group of nuclei, ventral division DTLv 4BE7B8
Basal ganglia Lateral group of nuclei, dorsal division DTLd 4BE7B8
Basal ganglia Anterior group of nuclei DTA 4BE7B8
Basal ganglia Dentate nucleus Dt 4BE7B8
Basal ganglia Dentate gyrus DG 4BE7B8
Basal ganglia Cuneus, striate Cun-str 4BE7B8
Basal ganglia Cuneus, peristriate Cun-pest 4BE7B8
Basal forebrain Cuneate nucleus Cu 5A7DFE
Basal forebrain Corticomedial group COMA 5A7DFE
Basal forebrain Claustrum Cl 5A7DFE
Basal forebrain Cingulate gyrus, parietal part, superior bank of gyrus CgGp-s 5A7DFE
Basal forebrain Cingulate gyrus, parietal part, inferior bank of gyrus CgGp-i 5A7DFE
Basal forebrain Cingulate gyrus, frontal part, superior bank of gyrus CgGf-s 5A7DFE
Mammillary region Cingulate gyrus, frontal part, inferior bank of gyrus CgGf-i FE61DE
Mammillary region Central nucleus CeA FE61DE
Mammillary region Corpus callosum cc FE61DE
Mammillary region CA4 field CA4 FE61DE
Mammillary region CA3 field CA3 FE61DE
Mammillary region CA2 field CA2 FE61DE
Anterior hypothalamic region CA1 field CA1 895AFE
Anterior hypothalamic region Basomedial nucleus BMA 895AFE
Anterior hypothalamic region Basolateral nucleus BLA 895AFE
Hypothamalus_tuberal Body of the caudate nucleus BCd 00ACEA
Hypothamalus_tuberal Amygdalohippocampal transition zone ATZ 00ACEA
Hypothamalus_tuberal Arcuate nucleus of medulla Arc 00ACEA
Hypothamalus_tuberal Angular gyrus, superior bank of gyrus AnG-s 00ACEA
Hypothamalus_tuberal Angular gyrus, inferior bank of gyrus AnG-i 00ACEA
Preoptic region Nucleus accumbens Acb 003BEB
Subthalamus Vestibular nuclei 8Ve 00E879
Thalamus Ventromedial hypothalamic nucleus VMH 00D132
Thalamus Temporal pole, superior aspect TP-s 00D132
Thalamus Temporal pole, medial aspect TP-m 00D132
Thalamus Subcuneiform nucleus SubCn 00D132
Thalamus Nucleus subceruleus SubC 00D132
Thalamus Superior rostral gyrus SRoG 00D132
Thalamus Septal nuclei SptN 00D132
Thalamus Superior occipital gyrus, inferior bank of gyrus SOG-i 00D132
Thalamus Superior olivary complex SOC 00D132
Thalamus Supraoptic nucleus SO 00D132
Thalamus Subcallosal cingulate gyrus SCG 00D132
Cerebellum Pontine raphe nucleus RPn A9EBED
Cerebellum Paraventricular nucleus of the hypothalamus PVH A9EBED
Cerebellum VIIIB, paravermis PV-VIIIB A9EBED
Cerebellum VIIIA, paravermis PV-VIIIA A9EBED
Cerebellum IX, paravermis PV-IX A9EBED
Cerebellum Precentral gyrus, bank of the central sulcus PrG-cs A9EBED
Cerebellum Posterior orbital gyrus POrG A9EBED
Cerebellum Postcentral gyrus, bank of the posterior central sulcus PoG-pcs A9EBED
Cerebellum Postcentral gyrus, inferior lateral aspect of gyrus PoG-il A9EBED
Cerebellum Paracentral lobule, anterior part, superior bank of gyrus PCLa-s A9EBED
Cerebellum Parolfactory gyri PaOG A9EBED
Cerebellum Medial parabrachial nucleus MPB A9EBED
Cerebellum Motor nucleus of trigeminal nerve Mo5 A9EBED
Cerebellum Midbrain raphe nuclei MBRa A9EBED
Cerebellum Lateral parabrachial nucleus LPB A9EBED
Cerebellum Inferior rostral gyrus IRoG A9EBED
Cerebellum Inferior occipital gyrus, superior bank of gyrus IOG-s A9EBED
Cerebellum Inferior occipital gyrus, inferior bank of gyrus IOG-i A9EBED
Cerebellum Globus pallidus, external segment GPe A9EBED
Cerebellum Fusiform gyrus, lateral bank of gyrus FuG-l A9EBED
Cerebellum Central gray substance of midbrain CGMB A9EBED
Cerebellum Cochlear nuclei 8Co A9EBED
Cerebellum Facial motor nucleus 7 A9EBED
Cerebellum Abducens nucleus 6 A9EBED
Cerebellum VIIIB Ve-VIIIB A9EBED
Cerebellum VIIIA Ve-VIIIA A9EBED
Cerebellum VIIB Ve-VIIB A9EBED
Cerebellum VIIAt Ve-VIIAt A9EBED
Cerebellum VI Ve-VI A9EBED
Pons V Ve-V 8ED6C4
Pons IX Ve-IX 8ED6C4
Pons IV Ve-IV 8ED6C4
Pons III Ve-III 8ED6C4
Pons Temporal pole, inferior aspect TP-i 8ED6C4
Pons Tuberomammillary nucleus TM 8ED6C4
Pons Supramammillary nucleus SuM 8ED6C4
Pons Superior colliculus SC 8ED6C4
Pons III, paravermis PV-III 8ED6C4
Pons Principal sensory nucleus of trigeminal nerve Pr5 8ED6C4
Pons Planum temporale PLT 8ED6C4
Pons Perifornical nucleus PeF 8ED6C4
Midbrain tectum Inferior frontal gyrus, opercular part opIFG 64A494
Midbrain tectum Olfactory tubercle OlfT 64A494
Midbrain tegmentum Basal nucleus of Meynert nbM 6C93A3
Midbrain tegmentum Medial mammillary nucleus MM 6C93A3
Midbrain tegmentum Lateral tuberal nucleus LTu 6C93A3
Midbrain tegmentum Lateral mammillary nucleus LM 6C93A3
midbrain tegmentum Lateral hypothalamic area, tuberal region LHT 6C93A3
Midbrain tegmentum Lateral hypothalamic area, anterior region LHA 6C93A3
Midbrain tegmentum Locus ceruleus LC 6C93A3
Midbrain tegmentum Inferior colliculus IC 6C93A3
Midbrain tegmentum VIIIB, lateral hemisphere He-VIIIB 6C93A3
Claustrum V, lateral hemisphere He-V 6570A4
Myelencephalon IV, lateral hemisphere He-IV 9F54A6
Myelencephalon Globose nucleus Glo 9F54A6
Myelencephalon Dorsomedial hypothalamic nucleus DMH 9F54A6
Myelencephalon Nucleus of the diagonal band, horizontal division DBv 9F54A6
Myelencephalon Nucleus of the diagonal band, vertical division DBh 9F54A6
Myelencephalon Cuneiform nucleus CnF 9F54A6
Myelencephalon Central medullary reticular group CMRt 9F54A6
Myelencephalon Central glial substance CGS 9F54A6
Myelencephalon Cingulate gyrus, retrosplenial part, superior bank of gyrus CgGr-s 9F54A6
Myelencephalon Bed nucleus of stria terminalis BST 9F54A6
Myelencephalon Anterior orbital gyrus AOrG 9F54A6
Myelencephalon Oculomotor nuclear complex 3 9F54A6
Myelencephalon Hypoglossal nucleus 12 9F54A6
White matter Dorsal motor nucleus of the vagus 10 827E79

“Structure category” refers to the anatomical ontological category of each tissue sample, which was derived from annotations in the Allen Institute data and is displayed in Fig. 4A. “Structure name” and “Structure acronym” refer to the anatomical name and abbreviation of each tissue sample as it appears in the Allen Institute data. “HEX” provides the hexadecimal color code of each structure category as it appears in Fig. 4A. cos, collateral sulcus; its, inferior temporal sulcus; mts, middle temporal sulcus.