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. 2017 Feb 7;68(5):965–982. doi: 10.1093/jxb/erw494

Table 7.

Statistical indicators for the goodness of fit of mature root system prediction via direct inference from seedling screens (cf. Fig. 5) and using root architecture simulation (cf. Figs 7 and 8)

RMSE is root mean square error; correlation gives the Spearman rank correlation coefficient with P-values; slope=1:1 and intercept=0 indicate if slope and intercept parameters of a linear regression are significantly (P-values) different from the 1:1 line and from zero (no intercept) respectively.

Indicators Direct comparison Model scenario 1 Model scenario 2 Model scenario 3
Root length
RMSE (cm) 565.6 591.8 839.2 614.8
Mean error (%) 99.0 19.3 29.8 23.8
Index of agreement (–) 0.41 0.94 0.51 0.95
Correlation (RSpearman; P-value) 0.42(P=0.099) 0.83
(P<0.001)
0.70
(P=0.002)
0.85
(P<0.001)
Slope=1:1 (P-value) <0.001 0.358 0.815 0.090
Intercept=0 (P-value) 0.123 0.115 0.507 0.455
First-order lateral root number
RMSE (n) 5.07 18.5 24.4 9.9
Mean error (%) 75.2 26.2 25.4 11.2
Index of agreement (–) 0.34 0.79 0.64 0.94
Correlation (RSpearman; P-value) 0.18
(P=0.497)
0.52
(P=0.038)
0.35
(P=0.178)
0.85
(P<0.001)
Slope=1:1 (P-value) <0.001 0.002 0.028 0.555
Intercept=0 (P-value) 0.059 0.004 0.081 0.137
Root depth distribution
RMSE (–) 0.18 0.18 0.10
Mean error (%) 71.2 73.8 38.5
Index of agreement (–) 0.52 0.47 0.92
Correlation (RSpearman; P-value) 0.25
(P=0.025)
0.20
(P=0.084)
0.74
(P<0.001)
Slope=1:1 (P-value) <0.001 <0.001 0.001
Intercept=0 (P-value) 0.005 0.002 0.233