Figure 9. Folds very similar to VK34 tetramer are adopted also by 2VK34 and 4VK34 oligonucleotides.
Imino and aromatic regions of 1D 1H NMR and H2′/H2″-aromatic region of 2D NOESY spectrum for (a) VK34 tetramer, (b) 2VK34 fold and (c) 4VK34 fold. The 1D 1H and 2D NOESY spectra of 2VK34 and 4VK34 folds were recorded at 1.0 mM oligonucleotide and 100 mM LiCl concentrations, 0 °C and pH 6.0. The 1D 1H and 2D NOESY spectra of tetrameric VK34 fold were recorded at 1.2 mM oligonucleotide and 100 mM NaCl concentrations, 0 °C and pH 6.0. All spectra were recorded with 200 ms mixing times. (d) Tetrameric topology and high-resolution structure of VK34. (e) Dimeric topology and high-resolution structure of 2VK34. (f) Monomeric topology and high-resolution structure of 4VK34. (g) Oligonucleotide sequences of 2VK34 and 4VK34 oligonucleotides.