TABLE 1.

List of V. parahaemolyticus strains sequenced in this study

Isolate	CFSAN no.	Yr	Country	Source	STa	Serotype	Accession no.	Coverage (×)
428/00	CFSAN018752	1998	Spain	C	17	O4:K11	LHAU00000000	145
30824	CFSAN018753	1999	Spain	C	17	O4:K11	LHAV00000000	88
9808/1	CFSAN018754	2004	Spain	C	3	O3:K6	LHAW00000000	131
UCM-V441	CFSAN018755	2002	Spain	E	52	O4:Kunk	LHAX00000000	107
UCM-V586	CFSAN018756	2003	Spain	E	45	O8:K22	LHAY00000000	114
906-97	CFSAN018757	1997	Peru	C	3	O3:K6	LHAZ00000000	127
357-99	CFSAN018758	1999	Peru	C	19	O3:Kunk	LHBA00000000	148
K0976	CFSAN001174	2004	USA	E	50	O6:K18	LHBB00000000	73
K1068	CFSAN018760	2004	USA	E	61	O5:Kunk	LHBC00000000	83
K1297	CFSAN018761	2004	USA	E	12	O5:K17	LHBD00000000	102
K1314	CFSAN018762	2004	USA	E	12	O4:K63	LHBE00000000	34
K1202	CFSAN018763	2004	USA	E	43	O4:K63	LHBF00000000	115
K1322	CFSAN018764	2004	USA	E	58	O3:K56	LHBG00000000	108
K1186	CFSAN018765	2004	USA	E	58	O3:K20	LHBH00000000	72
K1296	CFSAN018766	2004	USA	E	9	O10:K68	LHBI00000000	77
K1303	CFSAN018767	2004	USA	E	20	O1:Kunk	LHBJ00000000	131
NY3547	CFSAN001172	1998	USA	E	98	O4:K55	LHQW00000000	53
ATCC 17802	CFSAN022339	1951	Japan	C	1	O1:K1	MQUE00000000	92
K1193	CFSAN022890	2004	USA	E	15	O1:K9	SRR5070562	77
K1317	CFSAN022891	2004	USA	E	23	O1:K54	SRR5070560	129
K1302	CFSAN022892	2004	USA	E	50	O1:K25	SRR5070559	50
48262	CFSAN022893	1990	USA	C	43	O1:K56	SRR5070561	93
HC-01-22	CFSAN022894	2001	USA	C	43	O4:K63	SRR5070563	78
049-2A3	CFSAN022895	1997	USA	E	57	O4:K29	SRR5070568	65
HC-01-20	CFSAN022896	2001	USA	E	199	O1:Kunk	SRR5070567	96
M25-0B	CFSAN022897	1993	USA	E	22	O4:Kunk	SRR5070565	84
HC-01-06	CFSAN022898	2001	USA	E	199	O1:Kunk	SRR5070566	37
9546257	CFSAN022899	1995	USA	C	32	O4:K8	SRR5070569	144
98-506-B102	CFSAN022900	1998	USA	E	30	O5:K11	SRR5070574	91
98-506-B103	CFSAN022901	1998	USA	E	30	O5:K11	SRR5070571	112
98-513-F51	CFSAN022902	1998	USA	E	34	O4:K9	SRR5070570	95
98-548-D11	CFSAN023517	1998	USA	E	34	O4:K9	SRR5070572	110
98-605-A9	CFSAN023518	1998	USA	E	30	O5:K17	SRR5070573	43
98-605-A10	CFSAN023519	1998	USA	E	30	O5:K17	SRR5070586	99
99-524-A9	CFSAN023520	1999	USA	E	53	O3:K34	SRR5070584	98
99-780-C12	CFSAN023521	1999	USA	E	29	O11:Kunk	SRR5070588	148
DI-B11	CFSAN023522	1999	USA	E	54	O1:K22	SRR5070587	110
DI-A8	CFSAN023523	2000	USA	E	46	O1:K30	SRR5070585	136
DI-B-6-4	CFSAN023524	2000	USA	E	47	O1:K30	SRR5070601	102
CP-B-5	CFSAN023525	2000	USA	E	23	O1:K54	SRR5070598	132
DI-B-1	CFSAN023526	2000	USA	E	23	O1:K54	SRR5070600	82
DI-A-6-1	CFSAN023527	2000	USA	E	24	O1:K55	SRR5070597	142
DI-E5	CFSAN023528	2000	USA	E	60	O1:K55	SRR5070599	79
DI-B9	CFSAN023529	1999	USA	E	25	O1:K56	SRR5070649	103
DI-H8	CFSAN023530	1999	USA	E	26	O1:K56	SRR5070650	89
DI-C2	CFSAN023531	1999	USA	E	35	O4:K9	SRR5070648	70
DI-C5	CFSAN023532	1999	USA	E	35	O4:K9	SRR5070651	65
U5474	CFSAN023549	1980	Bangladesh	C	87	O3:K6	SRR5071102	93
PMA 1.5	CFSAN023550	2005	Chile	E	28	O3:K6	SRR5071104	24
PMA 2.5	CFSAN023551	2005	Chile	E	10	O4:Kunk	SRR5071129	30
PMA 3.5	CFSAN023552	2005	Chile	E	16	O4:Kunk	SRR5071130	71
PMA 16.5	CFSAN023553	2005	Chile	E	48	O4:K12	SRR5071131	95
PMA 45.5	CFSAN023555	2005	Chile	E	49	O3:K6	SRR5071133	122
PMA 79	CFSAN023557	2004	Chile	E	56	O2:Kunk	SRR5071135	43
PMA 112	CFSAN023558	2004	Chile	E	6	O3:K6	SRR5071136	45
PMA 189	CFSAN023559	2004	Chile	E	7	O3:K6	SRR5071134	136
PMA 337	CFSAN023560	2004	Chile	E	11	O7:Kunk	SRR5071137	59
PMA 339	CFSAN023561	2004	Chile	E	55	O4:Kunk	SRR5071139	36
PMA 3316	CFSAN023562	2004	Chile	E	13	O3:K6	SRR5071141	73
VpHY145	CFSAN023563	1999	Thailand	C	3	O4:K68	SRR5071143	83
KXV-641	CFSAN023564	1998	Japan	C	3	O1:K25	SRR5071140	52
AN-2189	CFSAN023565	1998	Bangladesh	C	3	O4:K68	SRR5071142	80
AP-11243	CFSAN023566	2000	Bangladesh	C	3	O1:Kunk	SRR5071144	59
PMA 109.5	CFSAN023556	2005	Chile	E	3	O3:K6	SRR5071138	33
PMA 37.5	CFSAN023554	2005	Chile	E	3	O3:K6	SRR5071132	37
TX2103	CFSAN023541	1998	USA	C	3	O3:K6	SRR5071094	103
BAC-98-3372	CFSAN023542	1998	USA	C	3	O3:K6	SRR5071092	104
BAC-98-3374	CFSAN023543	1998	USA	C	42	O3:K6	SRR5071095	118
BAC-98-4092	CFSAN023544	1998	USA	C	3	O3:K6	SRR5071096	126
AN-5034	CFSAN023545	1998	Bangladesh	C	3	O4:K68	SRR5071093	85
AO-24491	CFSAN023546	1999	Bangladesh	C	3	O1:K25	SRR5071106	94
VpHY191	CFSAN023547	1999	Thailand	C	3	O1:K25	SRR5071105	108
AN-16000	CFSAN023548	1998	Bangladesh	C	3	O1:Kunk	SRR5071103	90
Vp81	CFSAN023533	1996	India	C	3	O3:K6	SRR5070652	96
Vp155	CFSAN023535	1996	India	C	3	O3:K6	SRR5071101	132
Vp96	CFSAN023536	1996	India	C	3	O3:K6	SRR5071097	92
Vp208	CFSAN023537	1997	India	C	3	O3:K6	SRR5071099	123
AN-8373	CFSAN023538	1998	Bangladesh	C	3	O3:K6	SRR5071098	100
Vp2	CFSAN023540	1998	South Korea	C	3	O3:K6	SRR5071100	95
029-1(b)	CFSAN001611	1997	USA	E	36	O4:K12	JNTW02000000	104
48057	CFSAN001612	1990	USA	C	36	O4:K12	JNTX02000000	118
K1198	CFSAN001614	2004	USA	E	59	O4:K12	JNTY02000000	150
10292	CFSAN001617	1997	USA	C	50	O6:K18	JNTZ02000000	85
48291	CFSAN001618	1990	USA	C	36	O12:K12	JNUA02000000	99
F11-3A	CFSAN001619	1988	USA	E	36	O4:K12	JNUB02000000	113
NY-3483	CFSAN001620	1998	USA	C	36	O4:K12	JNUC02000000	72
K1203	CFSAN001173	2004	USA	E	59	O4:K12	JNUD02000000	47
98-513-F52	CFSAN001160	1998	USA	E	34	O4:K9	JNUE02000000	39
10290	CFSAN001613	1997	USA	C	37	O4:K12	JNUF02000000	51
JJ21-1C	CFSAN001615	1990	USA	E	38	O4:Kunk	LHPD00000000	64
W9OA	CFSAN001616	1982	USA	E	59	O4:K12	LHPE00000000	39
VP43-1A	CFSAN001621	1992	USA	E	36	O4:Kunk	LHQV00000000	92

^aC, clinical; E, environmental.