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. 2017 May 23;85(6):e00094-17. doi: 10.1128/IAI.00094-17

TABLE 2.

Primers used for PCR, cloning, and sequencing

Primer purpose and name Sequence (5′ to 3′)a
Construction of babA::cat
    HP0898:930U24_NotI AAC GCGGCCGC TTT AAG CCA CAA AAC CTC TAA AGA
    HP0896:148L25_HincII AAC GTCGAC GAT TGT TCA GCT TTT CAT AAT TGT C
    CAT_F_SacI AAC GAGCTC GCG GAC AAC GAG TAA AAG AG
    CAT_R_HincII AAC GTCGAC GCA GGA CGC ACT ACT CTC G
    HP0896:1234U23_SacI AAC GAGCTC TAT GTG GAA CAA ACC ATA ACG AA
    JHP0830:224L22_XhoI AAT CTCGAG TCA GCA TTC ACT TCC TTT TTG A
Construction of babB::cat
    JHP1167:383U18_NotI AAC GCGGCCGC CTC ACC ACG CAG AGG AAG
    HP0896:148L25_PstI AAC CTGCAG GAT TGT TCA GCT TTT CAT AAT TGT C
    CAT_F_SacI AAC GAGCTC GCG GAC AAC GAG TAA AAG AG
    CAT_R_PstI AAC CTGCAG GCA GGA CGC ACT ACT CTC G
    HP0896:1234U23_SacI AAC GAGCTC TAT GTG GAA CAA ACC ATA ACG AA
    HP1241:772L20_XhoI AAT CTCGAG TGG AAC TCG CTC GCA TAA TC
Construction of pJ231
    HP0898:751U24_NotI AAC GCGGCCGC ATC CAA TAC AAA AGA GCG GTG AGC
    BabAR19_SacI AAC GAGCTC TTA TCG CTT GCT TGA TGC AAG CTC
    CAT_F_HincII AAC GTCGAC GCG GAC AAC GAG TAA AAG AG
    CAT_R_SacI AAC GAGCTC GCA GGA CGC ACT ACT CTC G
    BabAF20_HincII AAC GTCGAC CAA CAA ACC ATA ACG AAT TTA ACC AAC AG
    HP0896:2097L26_XhoI AAC CTCGAG AAG CGA ACA CGT AAT TCA AAT ACA CG
Construction of pJ232
    HP0898:751U24_NotI AAC GCGGCCGC ATC CAA TAC AAA AGA GCG GTG AGC
    BabAR19_HincII AAC GTCGAC TTA TCG CTT GCT TGA TGC AAG CTC
    Kan_F_SacI AAC GAGCTC GGT ACC CGG GTG AC
    Kan_R_HincII AAC GTCGAC TCT AGA GGA TCC CC
    BabBF9_SacI AAC GAGCTC GAT TTT AGC GGT GAT TTC TTG AGC G
    HP0896:2097L26_XhoI AAC CTCGAG AAG CGA ACA CGT AAT TCA AAT ACA CG
Amplification and sequencing of babA locus
    BabAF14 GCA TCA AGC AAG CGA TAA CTT TAC TAA
    P160R ATA CCC TGG CTC GTT GTT GAA
    P178R CAT GTC CTG GCT CAT AAT ACG AA
    CAT_reverse CCC TGC ACA TAT AGT ATG ACG GTA A
    BabAF19 ATG CTA TAA TAC TCC AAA TAC ATT CCA A
Amplification and sequencing of babB locus
    BabBF3 CTT GAG CGT TAT TAG AAA TCT AGT GG
    P178R CAT GTC CTG GCT CAT AAT ACG AA
    CAT_reverse CCC TGC ACA TAT AGT ATG ACG GTA A
a

Restriction sites are underlined.