TABLE 3.
Genea | Direction of transcriptionb | Coordinatesc |
C. glutamicum R homologous gene
|
C. glutamicum ATCC 13032 homologous gene
|
C. efficiens homologous gene
|
C. diphtheriae homologous gene
|
Other homologous gene
|
|||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Gened | % Homologye | Gened | % Homologye | Gened | % Homologye | Gened | % Homologye | Speciesf | Gene or protein | Accession no. | % Homologye | |||
purM | − | 1480-404 | 2486 | 100 | 2494 | 99 | 2475 (purM) | 89 | 1919 (purM, purG) | 85 | Mt | purM | NP_335258.1 | 71 |
purF | − | 3153-1606 | 2487 | 99 | 2495 | 99 | 2476 (purF) | 87 | 1920 | 72 | Mt | purF | NP_335257.1 | 68 |
orf1 | − | 3583-3206 | 2488 | 97 | 2496 | 99 | 2477 | 70 | 1921 | 64 | Mt | Hypothetical protein Rv0807 | NP_335256.1 | 58 |
orf2 | + | 3621-4640 | 2489 | 97 | 2497 | 99 | 2478 | 83 | So | Cytosolic long-chain acyl-coenzyme A thioester Hydrolase family protein | AAN55797.1 | 46 | ||
orf3 | − | 5449-4685 | 2490 | 95 | 2498 | 99 | 2479 | 78 | 1922 | 55 | Mt | Hypothetical protein Rv1085c | NP_335559.1 | 38 |
purL | − | 7898-5550 | 2491 | 99 | 2499 | 99 | 2480 (purL) | 86 | 2130 | 23 | Mt | purL | NP_854484.1 | 65 |
purQ | − | 8523-7852 | 2492 | 100 | 2500 | 99 | 2481 (purQ) | 86 | Mt | purQ | NP_335241.1 | 68 | ||
orf4 | − | 8765-8520 | 2493 | 98 | 2501 | 98 | 2482 | 93 | Mt | Phosphoribosylformylglycinamidine synthase, PurS component | NP_335240.1 | 73 | ||
orf5 | − | 9332-8853 | 2494 | 98 | 2502 | 99 | 2483 | 74 | 1925 | 54 | Sc | Putative glutathione peroxidase | CAB88451.1 | 54 |
orf6 | + | 9520-12324 | 2495 | 97 | 2503 | 93 | 2484 | 69 | Pa | Hypothetical protein | E83157 | 32 | ||
orf7 | − | 13408-12719 | 2496 | 98 | 2505 | 99 | 2485 | 77 | Mt | Hypothetical protein | AAK45050.1 | 40 | ||
dctA | − | 14793-13453 | 2497 | 99 | 2506 | 99 | 2864 | 21 | 1992 | 28 | Mt | dctA | NP_337003.1 | 68 |
orf8 | − | 17240-15120 | 2498 | 99 | 2507 | 99 | 2486 | 77 | 1926 | 74 | Mb | Probale protease II PtrB (oligo- pepetidase B) | CAD93666.1 | 53 |
The open reading frames in Tn14751 were identified by BLASTX searches.
The direction of transcription is indicated by a plus sign (forward strand) or a minus sign (reverse strand).
The coordinate origin is the base immediately adjacent to the last base of IS14751L.
The genes of C. glutamicum R (unpublished data), C. glutamicum ATCC 13032 (accession no. NC_003450) (12), C. efficiens (accession no. NC_004369) (26), and C. diphtheriae (accession no. NC_002935) (5) are numbered according to the previously described annotations.
Levels of amino acid sequence homology.
Mt, Mycobacterium tuberculosis; So, Shewanella oneidensis; Sc, Streptomyces coelicolor; Pa, Pseudomonas aeruginosa; Mb, Mycobacterium bovis.