Table 1.
List of aldehyde oxidase genes in wheat with corresponding contig number, SNP markers, chromosome localization and map position on the durum (Maccaferri et al., 2015) and bread wheat (Wang et al., 2014) consensus maps.
| Gene | Carotenoid enzyme | SNP name | SNP id | Allele | Contig | Wheat map position | ||
|---|---|---|---|---|---|---|---|---|
| Chrom | Durum map | Bread map | ||||||
| AO-1 | Aldehyde oxidase 1 | CAP8_c2820_207 | IWB14642 | A/G | 5BL_10921744 | 5BL | - | - |
| RFL_Contig2772_3038 | IWB64051 | T/C | 5BL_10864426 | 5BL | - | - | ||
| RFL_Contig2772_2171 | IWB64049 | A/G | 5BL_10864426 | 5BL | - | - | ||
| RFL_Contig2772_1693 | IWB64048 | A/C | 5BL_10864426 | 5BL | 141.7 | 125.7 | ||
| D_GDRF1KQ01DK0HR_216 | IWB19179 | T/C | 5DL_2218680 | 5DL | - | 150.9 | ||
| GENE-2436_70 | IWB32929 | A/G | 5DL_3476694 | 5DL | - | - | ||
| AO-2 | Aldehyde oxidase 2 | Ex_c12642_2562 | IWB19755 | T/C | 2AL_6408908 | 2AL | - | - |
| Ku_c11131_911 | IWB38213 | A/G | 2AL_6408908 | 2AL | - | - | ||
| Kukri_c9197_1341 | IWB48277 | T/C | 2BL_8081481 | 2BL | 93.2 | 99.2 | ||
| Ra_c16283_1844 | IWB51213 | A/C | 2BL_8081481 | 2BL | - | - | ||
| Kukri_c9197_1171 | IWB48276 | A/G | 2BL_8081481 | 2BL | - | - | ||
| Excalibur_rep_c111561_524 | IWB30538 | A/G | 2BL_8003581 | 2BL | - | - | ||
| Kukri_rep_c101425_563 | IWB48641 | T/C | 2BL_8003581 | 2BL | - | - | ||
| RAC875_c16283_179 | IWB54261 | A/C | 2BL_8003581 | 2BL | - | - | ||
| Excalibur_rep_c111561_524 | IWB30538 | A/G | 2BL_8003581 | 2BL | - | - | ||
| Kukri_rep_c101425_563 | IWB48641 | T/C | 2BL_8003581 | 2BL | - | - | ||
| RAC875_c16283_179 | IWB54261 | A/C | 2BL_8003581 | 2BL | - | - | ||
| RAC875_rep_c106900_118 | IWB61642 | T/C | 2DL_9906604 | 2DL | - | - | ||
| AO3 | Aldehyde oxidase 3 | RAC875_c64451_465 | IWB59875 | T/C | 7AL_4455104 | 7AL | 180.3 | - |
| Kukri_c55360_910 | IWB46506 | T/C | 7AL_4455104 | 7AL | - | - | ||
| Kukri_c55360_1138 | IWB46505 | A/G | 7AL_4455104 | 7AL | - | - | ||
| Kukri_c5789_964 | IWB46700 | T/C | 7AL_4455104 | 7AL | - | - | ||
| Kukri_rep_c103039_607 | IWB48835 | T/C | 7AL_4455104 | 7AL | - | - | ||
| Excalibur_rep_c112889_341 | IWB30603 | A/G | 7AL_4455104 | 7DL | - | 184.2 | ||
| RAC875_c15047_109 | IWB54046 | T/C | 7BL_6713884 | 7BL | - | - | ||
| Excalibur_c2883_158 | IWB24759 | A/C | 7BL_6641589 | 7BL | - | - | ||
| Ku_c5789_663 | IWB39661 | A/G | 7BL_6641589 | 7BL | - | 136.3 | ||
| Kukri_rep_c110445_289 | IWB49452 | T/C | 7BL_1920530 | 7BL | - | - | ||
| Excalibur_rep_c104090_439 | IWB30010 | A/G | 7DL_3396507 | 7BL | - | 120.8 | ||
| wsnp_Ex_rep_c104090_88891443 | IWB79099 | A/G | 7DL_3396507 | 7BL | - | 121.2 | ||
| Ku_c5789_1180 | IWB39660 | A/C | 7DL_3391726 | 7BL/7DL | 155.7 | 120.8 | ||
| Kukri_c5789_1029 | IWB46699 | T/C | 7DL_3391726 | 7AL/7DL | 180.3 | 182.3 | ||
| RAC875_c89296_456 | IWB60958 | T/C | 7DL_3391726 | 7DL | - | - | ||
| Excalibur_rep_c101576_466 | IWB29738 | T/C | 7DL_3391726 | 7DL | - | - | ||