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. 2017 May 24;12(5):e0177553. doi: 10.1371/journal.pone.0177553

Table 2. Comparison of major features of 18 Poaceae chloroplast genomes from Ehrhartoideae and Bambusoideae subfamilies.

Subfamily Tribe (Subtribe) Species Total size LSC region IR region SSC region GenBank Accession
Length (bp) GC (%) Length (bp) GC (%) Length (bp) GC (%) Length (bp) GC (%)
Ehrhartoideae Oryzeae (Oryzinae) Oryza sativa ssp. indica 134,496 39.00 80,553 37.11 20,798 44.35 12,347 33.32 NC_008155
Oryza sativa ssp. japonica 134,551 39.00 80,604 37.11 20,802 44.35 12,343 33.37 AY522330
Oryza nivara 134,494 39.01 80,544 37.12 20,802 44.35 12,346 33.33 NC_005973
Oryza barthii 134,674 38.99 80,685 37.10 20,804 44.34 12,381 33.33 NC_027460
Oryza glumipatula 134,583 38.99 80,613 37.09 20,807 44.34 12,356 33.32 NC_027461
Oryza punctata 134,911 39.00 80,955 37.10 20,813 44.36 12,330 33.37 NC_027676
Oryza officinalis 134,604 38.97 80,623 37.08 20,797 44.35 12,387 33.28 NC_027463
Oryza australiensis 135,224 38.95 81,074 37.07 20,840 44.33 12,470 33.18 KJ830774
Oryza brachyantha 134,604 38.98 80,411 37.10 20,832 44.31 12,529 33.31 KT992850
Leersia tisserantii 136,550 38.88 81,865 37.01 21,329 44.05 12,027 33.23 JN415112
Oryzeae (Zizaniinae) Zizania latifolia 136,461 39.00 82,115 37.13 20,878 44.42 12,590 33.18 KT161956
Zizania aquatica 136,364 39.02 82,013 37.14 20,879 44.41 12,593 33.31 KJ870999
Rhynchoryza subulata 136,303 39.00 82,029 37.14 20,840 44.36 12,594 33.40 JN415114
Chikusichloa aquatica 136,563 39.04 82,314 37.21 20,838 44.37 12,573 33.41 KR078265
Chikusichloa mutica 136,603 39.04 82,327 37.20 20,839 44.37 12,598 33.37 KU696970a
Potamophila parviflora 134,551 39.07 80,604 37.19 20,800 44.32 12,347 33.58 GU592210b
Ehrharteae Microlaena stipoides 134,551 39.22 80,613 37.28 20,793 44.18 12,343 33.77 GU592211b
Bambusoideae Bambusodae Phyllostachys propinqua 139,704 38.88 83,227 36.96 21,800 44.23 12,877 33.14 JN415113

a Sequenced in this study;

b unfinished chloroplast genome.