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. 2017 May 15;195(10):1373–1383. doi: 10.1164/rccm.201605-1026OC

Table 3.

Significant Associations of Short-Term Diesel Exhaust Exposure and CpG Site Methylation Difference (Postexposure − Preexposure) in Adults with Asthma (n = 16)

Chr GWIS Locus Probe Probe Position (Build 37) CpG Site Location ΔFA* (Post − Pre) ΔDE (Post − Pre) DE P Value DE Adjusted P Value
5 ADCY2 cg04119977 7,826,972 ADCY2 (Body) −0.015 −0.019 0.0011 0.041
5 ADCY2 cg10995381 7,877,198 MTRR (Body) −0.013 −0.032 0.0011 0.041
11 DLG2 cg26449294 83,169,193 DLG2 (3′UTR) −0.010 −0.021 4.64 × 10−5 0.017
11 DLG2 cg09080874 83,284,905 DLG2 (Body) −0.015 −0.027 3.01 × 10−4 0.029
11 DLG2 cg27373604 83,372,714 DLG2 (5′UTR;Body) −0.021 −0.026 0.0021 0.041
11 DLG2 cg08432013 83,393,570 DLG2 (Body;TSS200) −0.010 −0.025 5.85 × 10−4 0.031
11 DLG2 cg02675969 83,526,604 DLG2 (Body) −0.010 −0.017 0.0018 0.041
11 DLG2 cg05405389 84,386,472 DLG2 (Body) −0.017 −0.035 0.0016 0.041
11 DLG2 cg18023263 84,403,466 DLG2 (Body) −0.020 −0.022 0.0013 0.041
11 DLG2 cg14716968 84,635,906 DLG2 (TSS1500;Body) −0.003 −0.037 4.28 × 10−4 0.029
11 DLG2 cg20275558 85,338,473 TMEM126B; DLG2 (TSS1500;TSS200) 0.011 0.042 1.07 × 10−4 0.020
11 DLG2 cg06698742 85,359,218 TMEM126A (5′UTR) 0.0009 0.0041 0.0014 0.041
18 MOCOS cg19453250 33,710,783 SLC39A6; ELP2 (TSS1500;Body) 0.0076 0.024 0.0019 0.041

Definition of abbreviations: ADCY2 = adenylate cyclase 2; Chr = chromosome; DE = diesel exhaust exposure; DLG2 = discs, large homolog 2; ELP2 = elongator acetyltransferase complex subunit 2; FA = filtered air; GWIS = genome-wide interaction study; MOCOS = molybdenum cofactor sulfurase; MTRR = 5-methyltetrahydrofolate-homocysteine methyltransferase reductase; SLC39A6 = solute carrier family 39 member A6; TMEM126A = transmembrane protein 126A; TMEM126B = transmembrane protein 126B; UTR = untranslated region.

P values in bold have a value ≤0.05.

*

ΔFA: relative methylation change postexposure versus preexposure of filtered air.

ΔDE: relative methylation change postexposure versus preexposure of diesel exhaust.

Adjusted P values using the false discovery rate method for multiple testing at a 5% level.