Table 1.
Editing sites in the mt protein genes of three Silene species
| Length (bp) | S. vulgaris | S. latifolia | S. noctiflora | |
|---|---|---|---|---|
| Complex I | ||||
| nad1 | 978 | 19(2) | 19(2) | 11(1) |
| nad2 | 1467 | 23(4) | 21(3) | 18(3) |
| nad3 | 357 | 8(1) | 8(1) | 5(1) |
| nad4 | 1488 | 16(0) | 16(0) | 11(0) |
| nad4L | 303 | 10(1) | 9(0) | 6(1) |
| nad5 | 2019 | 18(0) | 18(0) | 15(0) |
| nad6 | 570 | 11(2) | 10(2) | 6(0) |
| nad7 | 1173 | 19(1) | 19(1) | 9(1) |
| nad9 | 579 | 6(1) | 5(0) | 1(0) |
| Complex III | ||||
| cob | 1164 | 9(1) | 9(1) | 6(0) |
| Complex IV | ||||
| cox1 | 1572 | 0(0) | 0(0) | 0(0) |
| cox2 | 777 | 4(0) | 3(0) | 2(0) |
| cox3 | 798 | 1(0) | 1(0) | 1(0) |
| Complex V | ||||
| atp1 | 1509 | 3(0) | 3(0) | 0(0) |
| atp4 | 555 | 13(1) | 11(1) | 6(0) |
| atp6 | 720 | 11(1) | 11(1) | 7(0) |
| atp8 | 492 | 1(0) | 2(1) | 2(1) |
| atp9 | 225 | 2(0) | 4(1) | 1(0) |
| Cytochrome C biogenesis | ||||
| ccmB | 621 | 30(6) | 27(4) | 19(2) |
| ccmC | 666 | 24(4) | 23(3) | 15(1) |
| ccmFc | 1341 | 14(3) | 12(1) | 8(1) |
| ccmFn | 1743 | 23(2) | 22(0) | 16(2) |
| Ribosomal | ||||
| rpl2 | 1050 | NP | NP | NP |
| rpl5 | 558 | 6(0) | 6(0) | 4(0) |
| rpl16 | 405 | NP | NP | NP |
| rps3 | 1050 | NP | 4(0) | 3(0) |
| rps4 | 1089 | NP | NP | NP |
| rps7 | 447 | NP | NP | NP |
| rps12 | 378 | NP | NP | NP |
| rps13 | 351 | 0(0) | 1(0) | 0(0) |
| Other | ||||
| matR | 1986 | 8(1) | 8(1) | 6(1) |
| mttB | 753 | 18(3) | 15(0) | 11(1) |
| Total | 297(34) | 287(23) | 189(16) | |
The number of synonymous editing sites is in parentheses. NP indicates the absence of a functional copy in the mt genome. The numbers of editing sites that are different between S. vulgaris and S. latifolia are in bold.