Table 1. Virus species used for the validation of the diagnostic assays developed with the workflow designed in this study.
| Taxonomy (family, genus, species) | Abbreviation | Subtype | Cell type | Origina | ||
|---|---|---|---|---|---|---|
| Flaviviridae | ||||||
| Flavivirus | ||||||
| St. Louis encephalitis virus | SLEV | Type 1 | Vero E6-Lyon | NCPV | ||
| Usutu virus | USUV | Bologna | Vero E6-Lyon | UNIBO | ||
| Tick-borne encephalitis virus | TBEV | Hanzalova | Porcine kidney | IP ASCR | ||
| Japanese encephalitis virus | JPEV | Nakayama | Vero E6-Lyon | NCPV | ||
| West Nile virus | WNV | NY99 | Vero E6-Lyon | NCPV | ||
| West Nile virus | WNV | Dakar | Vero E6-Lyon | NCPV | ||
| Bunyaviridae | ||||||
| Nairovirus | ||||||
| Crimean-Congo hemorrhagic fever virus | CCHFV | N.A.b | BNI | BNI | ||
| Phlebovirus | ||||||
| Rift Valley fever virus | RVFV | H13/96 | Vero E6-Lyon | NCPV | ||
| Hantavirus | ||||||
| Seoul virus | SEOV | R22 | Vero E6-Lyon | NCPV | ||
aNCPV, National Collection of Pathogenic Viruses (Porton Down, United Kingdom).
BNI, Bernhard-Nocht-Institute for Tropical Medicine (Hamburg, Germany). IP ASCR, Institute of Parasitology—Academy of Sciences of the Czech Republic (Prague, Czech Republic). UNIBO, University of Bologna (Bologna, Italy).
bN.A., not available.