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. 2017 May 26;91(12):e00046-17. doi: 10.1128/JVI.00046-17

TABLE 1.

Data collection and refinement statistics for H15 HA apo and receptor analog complex

Parameter Value fora:
Apo 3'-SLN
Data collection statistics
    Beamline APS-23 APS-23
    Wavelength (Å) 1.0332 1.0332
    Space group P3 P3
    Unit cell (Å) a = b = 115.9; c = 128.4 a = b = 116.6; c = 129.1
    Resolution (Å) 50.00–3.10 (3.15–3.10) 50.00–2.75 (2.80–2.75)
    No. of observations 143,348 132,482
    No. of unique reflections 34,747 (1,596) 49,813 (2,489)
    Completeness (%) 98.7 (90.7) 97.4 (99.3)
    I/σ(I) 9.1 (1.7) 10.8 (1.7)
    CC1/2b 0.94 (0.89) 0.87 (0.52)
    Rsymc 0.18 (0.44) 0.14 (0.99)
    Rpimd 0.08 (0.23) 0.08 (0.58)
    Redundancy 4.1 (3.1) 2.7 (2.6)
Refinement statistics
    Resolution (Å) 50.00–3.10 (3.15–3.10) 50.00–2.75 (2.80–2.75)
    No. of reflections 34,651 49,791
    Rcryste/Rfreef 0.221/0.263 0.222/0.275
    No. of atoms
        Protein 7,788 7,736
        Carbohydrate 84 162
        Water 105
    Wilson B (Å2) 46 43
    Avg B value (Å2)
        Overall 48 46
        Water 44
        Ligand 72
RMSDg from ideal geometry
    Bond length (Å) 0.014 0.014
    Bond angle (°) 2.2 1.9
Ramachandran plot (%)h
    Favored 96.8 95.5
    Outliers 0.2 0.2
PDB ID 5TG8 5TG9
a

Values in parentheses are the outer shell statistics.

b

CC1/2 is the Pearson correlation coefficient between two random half data sets.

c

Rsym = Σhkl Σi | Ihkl,i − 〈Ihkl〉 |/Σhkl Σi Ihkl,i, where Ihkl,i is the scaled intensity of the ith measurement of reflection h, k, l, and 〈Ihkl〉 is the average intensity for that reflection.

d

Rpim = Σhkl [1/(n − 1)]1/2 Σi | Ihkl,i − 〈Ihkl〉 |/Σhkl Σi Ihkl,i, where n is the redundancy.

e

Rcryst = Σhkl | FoFc |/Σhkl | Fo | × 100, where Fo and Fc are the observed and calculated structure factors, respectively.

f

Rfree was calculated as for Rcryst, but on a test set of 5% of the data excluded from refinement.

g

RMSD, root mean square deviation.

h

Calculated using MolProbity (62).