Table 3.
Haploblock 2 | Frequency cases/controls | Proposed effect | χ2 | p-Value | Odds ratio (t, Wald test) |
---|---|---|---|---|---|
CCCCCCCGCTCGACGC | 0.274/0.366 | Protective | 4.047 | 0.044 | 0.628 (6.08) |
CTTTTCTGGCCGCGAC | 0.182/0.094 | Predisposing | 6.511 | 0.011 | 2.110 (4.72) |
The focal SNP rs2287845 in relative extended haplotype homozygosity analysis (Figure 4) is indicated in bold.