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. 2017 May 29;8:819. doi: 10.3389/fpls.2017.00819

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Copyright © 2017 Aamir, Singh, Meena, Upadhyay, Gupta and Singh.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Qualitative evaluation of the predicted model using PROCHECK and ProSA analysis. (A) The stereo chemical spatial arrangement of amino acid residues in the predicted models (SlWRKY3 and SlWRKY4) as computed with the PROCHECK server and were compared with experimentally resolved protein structures (1WJ2 and2YD). Most favored regions are colored red, additional allowed, generously allowed, and disallowed regions are indicated as yellow, light yellow, and white fields, respectively. (B) Qualitative evaluation using ProSA webserver, which generates a plot measuring the structural error at each residues in the protein and calculate the overall score for quality measurement. The ProSA score for SlWRKY3 and SlWRKY4 were found closer to the native structures.