Table 1.
Glycoform compositiona | Depictionb | IgG1c | IgG1i | IgG2b | IgG2a/c | IgG3 |
---|---|---|---|---|---|---|
H2N3F1 | x | x | x | x | ||
H5N2 | x | x | x | |||
H3N3F1 | x | x | x | x | x | |
H3N4 | x | x | x | |||
H6N2 | x | |||||
H4N3F1 | x | x | x | x | x | |
H3N4F1 | x | x | x | x | x | |
H4N4 | x | x | x | x | x | |
H5N3F1 | x | x | x | |||
H4N4F1 | x | x | x | x | x | |
H5N4 | x | x | x | x | ||
H3N5F1 | x | x | x | |||
H4N5 | x | |||||
H4N3F1G1 | x | x | x | x | x | |
H4N4G1 | x | |||||
H5N4F1 | x | x | x | x | x | |
H4N5F1 | x | x | x | x | ||
H5N3F1G1 | x | x | x | x | ||
H4N4F1G1 | x | x | x | x | x | |
H5N4G1 | x | x | x | x | x | |
H6N4F1 | x | x | x | x | x | |
H5N5F1 | x | x | ||||
H6N3F1G1 | x | x | x | x | x | |
H5N4F1G1 | x | x | x | x | x | |
H6N4G1 | x | |||||
H4N5F1G1 | x | x | x | x | x | |
H5N4G2 | x | x | ||||
H6N4F1G1 | x | x | x | x | x | |
H5N5F1G1 | x | x | x | |||
H5N4F1G1S1 | x | x | ||||
H5N4F1G2 | x | x | x | x | x | |
H5N5F1G2 | x | x | x |
aH: hexose, N: N-acetylhexosamine, F: fucose, G: N-glycolylneuraminic acid, S: N-acetylneuraminic acid.
bSymbols used: green circle: mannose, yellow circle: galactose, blue square: N-acetylglucosamine, red triangle: fucose, white diamond: N-glycolylneuraminic acid, pink diamond: N-acetylneuraminic acid. The proposed glycan structures are based on fragmentation and literature (17, 23, 35, 36). See also Table S9 in Supplementary Material.
cPeptide sequence of IgG1: EEQFNSTFR, IgG1i: EEQINSTFR, IgG2b: EDYNSTIR, IgG2a/c: EDYNSTLR, IgG3: EAQYNSTFR.