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. 2017 May 30;18:423. doi: 10.1186/s12864-017-3805-4

Table 3.

Genetic diversity and divergence among cultivars/lines and landraces of the Andean and Mesoamerican gene pools

Group S P NAP HO (SE) HE (SE) F (SE) FST (SE) FIS (SE) FIT (SE)
Mesoamerican Cult/Linesa 57 87.51% 463 0.038 ± 0.001 0.177 ± 0.003 0.652 ± 0.006 0.031 ± 0.001 0.836 ± 0.001 0.841 ± 0.001
Landraces 54 90.78% 627 0.040 ± 0.001 0.185 ± 0.002 0.646 ± 0.006
Total 111 100.00% - 0.039 ± 0.001 0.185 ± 0.002 0.652 ± 0.006
Andean Cult/Linesa 31 88.39% 1217 0.046 ± 0.002 0.145 ± 0.002 0.647 ± 0.007 0.012 ± 0.002 0.738 ± 0.001 0.741 ± 0.001
Landraces 33 73.49% 533 0.050 ± 0.002 0.099 ± 0.002 0.377 ± 0.007
Total 64 100.00% - 0.048 ± 0.002 0.123 ± 0.002 0.561 ± 0.007

The sample size (S), percentage of polymorphic loci (P), number of private alleles (NAP), observed heterozygosity (H O), gene diversity (H E), inbreeding coefficient (F), genetic differentiation (F ST), fixation index (F IS), total inbreeding (F IT), and standard deviations (SE) are presented

aCult/Lines: cultivars/lines