Table 4.
Gene pool | Group | N | S | Θw | SE – θw | NDw | SE - NDw | π | SE - π | P | M |
---|---|---|---|---|---|---|---|---|---|---|---|
Andean | Cult/Linesa | 31 | 3506 | 0.000777 | 0.000015 | 0.000554 | 0.000014 | 0.002171 | 0.000281 | 3858 | 1415 |
Landraces | 33 | 2647 | 0.000580 | 0.000013 | 0.000386 | 0.000011 | 0.001357 | 0.000228 | 3190 | 2083 | |
Total | 64 | 3889 | 0.000728 | 0.000013 | 0.000471 | 0.000012 | 0.001781 | 0.000266 | 4364 | 909 | |
Mesoamerican | Cult/Linesa | 57 | 3283 | 0.000641 | 0.000014 | 0.000665 | 0.000020 | 0.004386 | 0.000488 | 4177 | 1096 |
Landraces | 54 | 3460 | 0.000667 | 0.000014 | 0.000677 | 0.000019 | 0.004330 | 0.000566 | 4340 | 933 | |
Total | 111 | 3957 | 0.000667 | 0.000012 | 0.000685 | 0.000019 | 0.004541 | 0.000572 | 4778 | 495 | |
Whole | All | 181 | 5241 | 0.000713 | 0.000010 | 0.002038 | 0.000029 | 0.017125 | 0.001540 | 5273 | 0 |
The number of samples (N), number of segregating sites (S), Watterson’s nucleotide diversity (θw), nucleotide diversity within (NDw), diversity from Nei (π), number of polymorphic SNPs (P), number of monomorphic SNPs (M), and standard deviations (SE) are presented
aCult/Lines: cultivars/lines