Table 2.
Locus | Sample localities | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
11°N | 9°N | GARa | 7°S | 11°S | 17°S | 23°S | 32°S | 38°S | ||
16S rRNA encoding gene (300 bp) |
N b | - | 13,310 | - | 2008 | 7531 | 6688 | 1899 | 6400 | 3046 |
h c | - | 7 | - | 3 | 6 | 6 | 3 | 4 | 5 | |
H d | - | 0.030 | - | 0.157 | 0.020 | 0.029 | 0.026 | 0.009 | 0.029 | |
π e | - | 1.0E-04 | - | 5.3E-04 | 6.6E-05 | 9.5E-05 | 8.7E-05 | 3.0E-05 | 9.8E-05 | |
COI Cytochrome C oxidase subunit I (443 bp) |
N | 3294 | 3692 | 1583 | 2246 | 2157 | 2545 | 1029 | 2332 | 737 |
h | 36 | 24 | 40 | 8 | 11 | 59 | 17 | 33 | 19 | |
H | 0.80 | 0.70 | 0.72 | 0.77 | 0.68 | 0.86 | 0.84 | 0.67 | 0.73 | |
π | 0.003 | 0.002 | 0.003 | 0.003 | 0.002 | 0.003 | 0.004 | 0.002 | 0.003 | |
dnaK Chaperone protein (469 bp) |
N | 2465 | 3100 | 2995 | 2362 | 2671 | 1876 | 1967 | 2367 | 2300 |
h | 5 | 39 | 23 | 22 | 19 | 45 | 4 | 33 | 43 | |
H | 0.42 | 0.78 | 0.62 | 0.80 | 0.67 | 0.65 | 0.45 | 0.82 | 0.83 | |
π | 0.001 | 0.003 | 0.002 | 0.003 | 0.002 | 0.002 | 0.001 | 0.003 | 0.003 | |
pgi Glucose-6-phosphate isomerase (441 bp) |
N | 1966 | 2986 | 2466 | 1972 | 1918 | 2668 | 1339 | 3747 | 1528 |
h | 35 | 30 | 57 | 16 | 16 | 70 | 11 | 151 | 103 | |
H | 0.82 | 0.85 | 0.85 | 0.67 | 0.70 | 0.87 | 0.46 | 0.91 | 0.91 | |
π | 0.004 | 0.004 | 0.004 | 0.003 | 0.003 | 0.004 | 0.002 | 0.008 | 0.006 | |
pykF Pyruvate kinase (404 bp) |
N | 2234 | 3051 | 3475 | 2770 | 3020 | 2629 | 1602 | 3150 | 1934 |
h | 39 | 37 | 57 | 32 | 65 | 43 | 21 | 87 | 39 | |
H | 0.75 | 0.81 | 0.77 | 0.74 | 0.90 | 0.79 | 0.79 | 0.88 | 0.78 | |
π | 0.003 | 0.006 | 0.005 | 0.006 | 0.006 | 0.003 | 0.004 | 0.006 | 0.003 | |
rpoD RNA polymerase, sigma D factor (388 bp) |
N | 3326 | 4328 | 3901 | 3650 | 4090 | 3717 | 2403 | 4797 | 2199 |
h | 30 | 26 | 25 | 26 | 22 | 42 | 27 | 18 | 42 | |
H | 0.84 | 0.76 | 0.81 | 0.80 | 0.80 | 0.64 | 0.70 | 0.65 | 0.68 | |
π | 0.004 | 0.003 | 0.004 | 0.004 | 0.004 | 0.002 | 0.004 | 0.002 | 0.003 | |
soxA Sulfur oxidation protein A (361 bp) |
N | 4196 | 5036 | 4085 | 3763 | 4652 | 3370 | 2715 | 3879 | 4105 |
h | 6 | 9 | 12 | 7 | 3 | 5 | 8 | 4 | 6 | |
H | 0.45 | 0.70 | 0.70 | 0.47 | <0.01 | 0.34 | 0.03 | 0.03 | 0.17 | |
π | 0.001 | 0.001 | 0.002 | 0.001 | <0.001 | 0.001 | <0.001 | <0.001 | <0.001 |
aGalápagos Rift
bNumber of sequence reads
cNumber of distinct DNA sequences estimated from the data with 1% of error-correction
dDiversity of sequences estimated from the data with 1% of error-correction
eNucleotide diversity estimated from the data with 1% of error-correction