Table 3.
Gene name | Locus name | Transcripts | Coordinate (5′–3′) | Transcript length (bp) | CDS (bp) | Protein | Localization | ||
---|---|---|---|---|---|---|---|---|---|
Length (bp) | MW (kDa) | pI | |||||||
Mt DJ-1A | Medtr2g078060 | Medtr1g022325.1 | 32401642–32405412 | 3968 | 1287 | 428 | 46.87 | 7.25 | Cha,b,c |
Mt DJ-1B | Medtr3g064093 | Medtr3g064093.1 | 28828715–28828368 | 510 | 279 | 92 | 10.43 | 6.33 | ExCa, Pma, Cyb |
Mt DJ-1C | Medtr3g064115 | Medtr3g064115.1 | 28837989–28837425 | 626 | 285 | 94 | 10.25 | 6.77 | ExCa, Pma, Cya,b |
Mt DJ-1D | Medtr3g064140 | Medtr3g064140.1 | 28843504–28840287 | 3588 | 1164 | 387 | 41.41 | 5.97 | Cya,b |
MtDJ-1E | Medtr4g085900 | Medtr4g085900.1 | 33593600–33596516 | 3437 | 1356 | 451 | 48.20 | 9.42 | Mta, Cha,b,c |
Medtr4g085900.2 | 33593600–33595499 | 3437 | 1014 | 337 | 36.25 | 6.95 | Pma, Mta,b, Cha,b,c | ||
Bp, base pair; MW, molecular weight; kDa, kilo Dalton; Ch, chloroplast; Cy, cytosol; Mt, mitochondria; ExC, extra cellular; Nu, nuclear; Pm, plasma membrane. aLocalization prediction by CELLO v.2.5 (http://cello.life.nctu.edu.tw/). bLocalization prediction by pSORT (http://www.genscript.com/wolf-psort.html). cChloroplast localization signal confirmed by ChloroP (http://www.cbs.dtu.dk/services/ChloroP/).