TABLE 3.
Integration events characterized by LAM-PCR and DNA sequencinga
| IE | Cell line | Relaxase | No. of sequences | Identity (%) | Chr | Integration locus | Missing bp |
|---|---|---|---|---|---|---|---|
| 1 | EA.hy926 | TrwC | 19 | 99.75 | 11 | 35225119 | 0 |
| 2 | EA.hy926 | TrwC | 402 | 100 | 11 | 35225119 | 0 |
| 3 | HeLa | TrwC::BID | 15 | 98.25 | 2 | 37383046 | 15 |
| 4 | HeLa | TrwC::BID | 114 | 100 | 2 | 111118923 | 16 |
| 5 | HeLa | TrwC::BID | 15 | 100 | 6 | 9173423 | 18 |
| 6 | HeLa | TrwC::BID | 84 | 99.48 | 12 | 28128063 | 16 |
| 7 | HeLa | TrwC::BID | 21 | 100 | 13 | 83099211 | 0 |
| 8 | HeLa | TrwC::BID | 95 | 99.72 | 16 | 68832248 | 16 |
| 9 | HeLa | TrwC::BID | 15 | 100 | 19 | 18303607 | 14 |
The information collected for each integration event is shown. Number of sequences indicates the number of times the sequence read was found. Missing base pairs indicates the number of bp that are missed in the read with respect to the plasmid sequence until the nic site. IE, integration event; Chr, chromosome.