Figure - PMC

Skip to main content

An official website of the United States government

Here's how you know

Here's how you know

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

View full-text article in PMC

. 2017 Jun;27(6):1050–1062. doi: 10.1101/gr.214288.116

Search in PMC
Search in PubMed
View in NLM Catalog
Add to search

© 2017 You et al.; Published by Cold Spring Harbor Laboratory Press

This article, published in Genome Research, is available under a Creative Commons License (Attribution-NonCommercial 4.0 International), as described at http://creativecommons.org/licenses/by-nc/4.0/.

PMC Copyright notice

Figure 1. — Error-prone unstranded transcriptome assembly. (A,B) Sensitivities (A) and specificities (B) of stranded (orange diamond) and unstranded (navy diamond) assemblies constructed from ENCODE RNA-seq data are shown over the number of mapped reads. (C) Classification of transfrags assembled from unstranded RNA-seq data. Graphs on the top are signals from stranded RNA-seq data (blue is the signal in the forward direction, and red is the signal in the reverse direction). (D) Shown are the percentages of transfrags belonging to the five groups—correct (red), ambiguous (blue), undetermined (purple), incorrect (black), and unsupported (yellow)—in HeLa and mES cells. (E) The specificity (light blue) and sensitivity (red) of the five groups compared to the reference protein-coding genes in HeLa (left, top) and mES cells (left, bottom). The number of multiexonic (dark gray) and single-exonic (gray) transfrags are indicated in each group (right).