TABLE III.
Quantitative RT-PCR Mean CT (+/−SD) Values and Fold Changea of Selected Probes From the Gene Expression Microarrays Comparing Gene Expression in Brain of Normal Littermates to PWS IC Deletion Mice
| Group | Pomc* | Mc5r** | AK013560 | BB314814 | BB182944 |
|---|---|---|---|---|---|
| Control littermates | 21.4 (0.5) | 24.7 (0.3) | 22.5 (0.9) | 38.2 (0.7) | 32.5 (0.7) |
| PWS IC deletion | 18.1 (0.6), 9.9-fold change | 23.6 (0.5), 2.1-fold change | nd | nd | nd |
Significantly different by t-test.
nd, not detected.
The CT was set at the narrowest portion of the logarithmic phase of amplification in the quantitative RT-PCR reaction. Fold change = 2 |Control CT − PWS IC CT| (e.g., 2|21.4−18.1| = 23.3 = 9.9-fold change).
P=0.002.
P=0.019.