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. 2017 Jun 1;7:2593. doi: 10.1038/s41598-017-02464-y

Table 2.

Gabp-alpha associated, in silico predicted binding sites: Binding sites are clustered by ATAC-seq signal into open (c1) and closed (c2) regions. For each query indicated as rows, the percentage of peaks with respective annotation is listed. Query 0 to 4 reflect typical promotor definitions, query 5 reflects open intergenic regions. Table is based on the best per query result file.

Query Feature - filter attribute Anchor Distance Gabpa
Cluster 1 Cluster 2
0 gene - protein coding start 1000:500 86 4
1 gene - protein coding start 2000:500 87 6
2 gene - protein coding start 3000:500 88 8
3 gene - protein coding start 5000:500 89 11
4 gene - pseudogene start 5000:500 1 2
5 gene - protein coding start 100000 100 78