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. 2004 Dec 17;32(22):6627–6635. doi: 10.1093/nar/gkh1005

Table 4. Over-represented motifs identified by MEMEa.

Motifs Consensus Frequency (%) TF E-value
1 GSGDGSMWGRGGSRGGRS 95 MZF1 2.2E−088
2 VSSYYYMCYCYCKCCHRS 100 SP1 6.9E−041
3 YCYRSSYYCCSGSYYC 100 AP2 5.3E−019
4 CCCYKCCYCHBSCYCSCB 100 GKLF 3.2E−089
5 CCCCGCCCCCCCCCCTCC 100 GC-signal 1.2E−030
6 KYCRCCAKGTTGGTCAGG 24 ERE half-site 1.9E−009
7 GRSCRSCDSCHBBYCC 61 novel 1.8E−002
8 SSSSGSGKYSGSKSSSGS 72 E2F 1.4E−016
9 KRSRGRGRSMSVGGCDG 66 ZF5 2.4E−007
10 YVMKKBBMCYSCYKYDSY 39 novel 2.6E−005

aThe motifs identified by MEME program on a basis of a dataset which consists of 35 experimentally confirmed ERα targets and 42 ERα target candidates from ChIP-on-chip.