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. 2017 May 31;5:e3398. doi: 10.7717/peerj.3398

Table 1. Candidate housekeeping genes and their primer sequences for qRT-PCR.

Accession Gene name Gene symbol Biological function Primer sequence (5′–3′) Tm (°C) Product size (bp) Efficiency (%)
c85865_g1 Elongation factor-1α EF-1α Essential component of the eukaryotic translational apparatus f: CGAGATCAAGGAGAAGTGCG 58.5 182 101.4
r: CAACGGTCTGCTTCATGTCA
c154556_g1 α-actin ACT Cytoskeletal structural protein f: CGAGAACAGGTACACGCAAT 58.5 166 97.5
r: GTTGAAGGACATGCGGAACT
c104226_g1 Cytochrome c oxidase subunit 1 COX1 Respiratory electron transport chain of mitochondria f: CTCCTGATATAGCTTTCCCTCG 58.5 165 97.7
r: CTACAGAACCACCAGCATGAG
c205682_g1 Nicotinamide adenine dinucleotide dehydrogenase [ubiquinone] 1α subcomplex subunit 7 NDUFA7 Electron transport in the respiratory chain f: GGGAGACGGGAAAACTTGAC 58.5 152 99.8
r: AGGGAGGTGACAATTAGCCA
c121877_g2 60S ribosomal protein L5 RL5 60S ribosomal subunit f: GTGGAGGATGAGGATGGACA 58.5 184 96.0
r: CTGCCTTGTACTCGTTGGTC
c64332_g1 60S ribosomal protein L28 RL28 60S ribosomal subunit f: CGTGCGTAACATCACCAAGA 57.5 151 102.4
r: CACCACAGCTACCACACATT
c149072_g1 Glyceraldehyde 3-phosphate dehydrogenase GAPDH Glycolytic enzyme f: CTCTACCAGTCAACGCTCCA 58.5 138 97.6
r: AATGCGACACCCATCAGAGA
c150134_g1 β-tubulin TUBB Structural protein f: CACTTTCGTGGGCAACTC 57.5 170 96.0
r: ACTCGGACACCAGGTCGT
c64251_g1 40S ribosomal protein S25 RS25 40S ribosomal subunit f: ACAAGATGCTGAAGGAGGTG 57.5 224 99.5
r: ACGCCAGACAAACATGAAAA
c112836_g1 40S ribosomal protein S8 RS8 40S ribosomal subunit f: TGGTGAAGTCCTGCATCG 57.5 111 97.6
r: CCTGGGCTGACAGTTTGA
c68556_g1 Ubiquitin-conjugating enzyme E2 UBE2 Protein degradation f: TTCCTGGACAACTGTCATTCT 57.5 378 100.3
r: CCTTTCCTCCCTACATTATCTT
c105544_g1 Histone H3 HH3 Essential structure of nucleosome f: TACAGGCAGCAGATCAGGTT 56.5 366 99.0
r: CCAGGAAAGTAAGGAGCAGAG
c45955_g1 Peptidyl prolyl cis-trans isomerase A PPIA Immunoregulation f: ATCAGAACACGCTTTCCTTT 57.5 235 97.8
r: CCAAACCCTTTCTCACCAG