Table 2.

Rhizarian Transcriptomes from MMETSP (Keeling et al. 2014) Used in This Study.

Sample ID	Phylum	Species	Strain	Transcriptsa
MMETSP0040	Chlorarachniophyta	Lotharella oceanica	CCMP622	17,354
MMETSP0041	Chlorarachniophyta	Lotharella globosa	LEX01	25,644
MMETSP0042	Chlorarachniophyta	Amorphochlora amoebiformisb	CCMP2058	23,387
MMETSP0045	Chlorarachniophyta	Bigelowiella natans	CCMP 2755	22,651
MMETSP0109	Chlorarachniophyta	Chlorarachnion reptans	CCCM449	26,481
MMETSP0110	Chlorarachniophyta	Gymnochlora sp.	CCMP2014	15,507
MMETSP0111	Chlorarachniophyta	Lotharella globosa	CCCM811	19,670
MMETSP0112	Chlorarachniophyta	Lotharella globosa	CCCM811	11,910
MMETSP0113	Chlorarachniophyta	Norrisiella sphaerica	BC52	14,550
MMETSP0186	Cercozoa	Minchinia chitonis	Missing	461
MMETSP1052	Chlorarachniophyta	Bigelowiella natans	CCMP623	24,186
MMETSP1318	Chlorarachniophyta	Partenskyella glossopodia	RCC365	15,025
MMETSP1358	Chlorarachniophyta	Bigelowiella natans	CCMP1242	18,273
MMETSP1359	Chlorarachniophyta	Bigelowiella longifila	CCMP242	15,959
MMETSP1384	Foraminifera	Ammonia sp.	Missing	31,225
MMETSP1385	Foraminifera	Elphidium margaritaceum	Missing	25,184

^aThe number of amino acid sequences for the sample.

^bAmorphochlora amoebiformis is called Lotharella amoebiformis in MMETSP, but it was moved to the genus Amorphochlora by Ishida et al. (2011).