Table 2. Sequence divergence of 49 variable coding regions (>150 bp) from 11 chloroplast genomes of Schima, with one of the Inverted Repeat regions removed.

Fragments	Length (bp)	Aligned length (bp)	Variable positions	Nucleotide substitutions	Number of indels	Total length of indels	Percent variability (%)
matK	1527	1527	5	5	0	0	0.33
psbK	186	186	1	1	0	0	0.54
psbI	153–156	156	3	0	1	3	0.64
atpA	1524	1524	3	3	0	0	0.20
atpF	567	567	2	2	0	0	0.35
atpI	744	744	1	1	0	0	0.13
rps2	711	711	1	1	0	0	0.14
rpoC2	4137	4137	11	11	0	0	0.27
rpoC1	2061	2061	3	3	0	0	0.15
rpoB	3213	3213	11	11	0	0	0.34
psbC	1422	1422	3	3	0	0	0.21
psaB	2205	2205	2	2	0	0	0.09
psaA	2253	2253	6	6	0	0	0.27
rps4	606	606	2	2	0	0	0.33
ndhK	678	678	1	1	0	0	0.15
ndhC	363	363	2	2	0	0	0.55
atpE	402	402	1	1	0	0	0.25
atpB	1497	1497	1	1	0	0	0.07
rbcL	1428	1428	3	3	0	0	0.21
accD	1542	1542	4	4	0	0	0.26
ycf4	555	555	3	3	0	0	0.54
cemA	690	690	2	2	0	0	0.29
petA	963	963	2	2	0	0	0.21
rpl20	354	354	1	1	0	0	0.28
rps12	372	372	1	1	0	0	0.27
clpP	645	645	3	3	0	0	0.47
psbB	1527	1527	2	2	0	0	0.13
petB	663	663	4	4	0	0	0.60
rpoA	1014	1014	2	2	0	0	0.20
rps11	417	417	3	3	0	0	0.72
infA	234	234	1	1	0	0	0.43
rps8	408	408	1	1	0	0	0.25
rpl14	369	369	3	3	0	0	0.81
rpl16	411	411	2	2	0	0	0.49
rps3	657	657	2	2	0	0	0.30
rpl22	474	474	1	1	0	0	0.21
ycf2	6867–6873	6873	8	2	1	6	0.04
rps7	468	468	1	1	0	0	0.21
ndhF	2247–2253	2253	26	14	2	12	0.71
rpl32	162	162	1	1	0	0	0.62
ccsA	963	963	10	10	0	0	1.04
ndhD	1530	1530	3	3	0	0	0.20
psaC	246	246	1	1	0	0	0.41
ndhE	306	306	1	1	0	0	0.33
ndhG	531	531	3	3	0	0	0.56
ndhA	1092	1092	2	2	0	0	0.18
ndhH	1182	1182	2	2	0	0	0.17
rps15	273	273	3	3	0	0	1.10
ycf1	5652–5658	5658	43	37	1	6	0.67