TABLE 2.
Putative new adhesins in E. coli K-12 strain MG1655 displaying homology to Ag43
| Gene | Blattner designation | Protein size (amino acids) | % Similarity with flu (ClustaIW)a |
|---|---|---|---|
| flu | b2000 | 1,039 | 100 (1,039) |
| ypjA | b2647 | 1,526 | 46 (1,254) |
| yejOb | b2190 | 842 ± 21 | 52 (1,052) |
| ydhQ | b1664 | 418 | 27 (1,039) |
| ydbAb | b1401-b1405 (b4492) | 852 ± 1,106 | 35 (2,003) |
| ycgH | b1169-b1170 (b4491) | 506 ± 337 | 48 (1,039) |
| yfaL | b2233 | 1,250 | 46 (1,254) |
| ydeK | b1510 | 1,325 | 46 (1,330) |
| ydeU | b1509 | 466 | 29 (1,039) |
| yaiTb | b0371-b0374 | 486 ± 466 | 53 (1,045) |
| ycgV | b1202 | 955 | 54 (1,056) |
| yeeJ | b1978 | 2,358 | 28 (2,358) |
a
The values in parentheses are the sizes of the ClustalW alignments (in amino acids).
b
The protein is interrupted by an IS element. The size of the protein corresponds to the size of the reconstituted protein.