Table 1. Predicted conformational epitopes of C protein.
Conformational epitopes (CEP) | #Residues | Number of residues | Score |
---|---|---|---|
CEP1 | M1, N2, N3, Q4 | 4 | 0.943 |
CEP2 | R98, R100, S101, V102, T103, M104, L105, L106, M107, L108, M109, P110, T111, A112, L113, A114 | 16 | 0.842 |
CEP3 | R5, K7, T8, A9, R10, P11, S12, F13, N14, M15, L16, K17 | 12 | 0.780 |
CEP4 | F33, S34, K35 | 3 | 0.614 |
CEP5 | G36, L37, L38, S39, G40, Q41, G42, P43, M44 | 9 | 0.588 |
CEP6 | S89, S90, N93, I94, M95, N96, R97 | 7 | 0.568 |
CEP7 | K73, K74, N75 | 3 | 0.561 |
#Epitope residues are given with reference to DENV1 isolate AY713476.
Prediction tool: Ellipro, Cut-off score: 0.5.